Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12537 and 12538 are separated by 1245 nucleotides12538 and 12539 are separated by 933 nucleotides12539 and 12540 are separated by 561 nucleotides12540 and 12541 are separated by 1700 nucleotides mRNA_4169: 12537 - K13299 GSTK1 glutathione S-transferase kappa 1, at 1,522,602 to 1,523,728 12537 mRNA_4170: 12538 - KOG1256 Long-chain acyl-CoA synthetases (AMP-forming), at 1,524,974 to 1,527,080 12538 mRNA_4171: 12539 - KOG2806 Chitinase, at 1,528,014 to 1,529,581 12539 mRNA_4172: 12540 - KOG1212 Amidases, at 1,530,143 to 1,531,631 12540 mRNA_4173: 12541 - KOG2348 Urea transporter, at 1,533,332 to 1,534,654 12541
Group Condition mRNA_4169 mRNA_4170 mRNA_4171 mRNA_4172 mRNA_4173
12537 12538 12539 12540 12541
growth on oleic acid YNB Glucose -0.7 -0.1 -0.1 N.D. -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.0 -0.6 N.D. -0.4
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.1 -0.4 N.D. -0.7
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 -0.5 N.D. -0.6
auxotrophy YNB Glucose -0.1 +0.1 -0.6 N.D. -0.4
growth on ricinoleic acid YNB Glucose -0.1 +0.0 -0.6 N.D. -0.3
auxotrophy Dropout Complete -0.0 +0.0 -0.5 N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.0 -0.5 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.1 -0.1 N.D. -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.3 -0.1 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.2 -0.1 N.D. -0.2
growth on ypd YPD -0.4 +0.1 -0.2 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 -0.2 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.0 +0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 -0.4 N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.3 -0.2 N.D. +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 +0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.2 +0.4 N.D. -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 +0.9 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.0 +0.6 N.D. +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.7 +0.0 +0.7 N.D. -0.0
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