Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12544 and 12545 are separated by 272 nucleotides12545 and 12546 are separated by 165 nucleotides12546 and 12547 are separated by 721 nucleotides12547 and 12548 are separated by 259 nucleotides mRNA_4176: 12544 - KOG4093 Uncharacterized conserved protein, at 1,542,041 to 1,542,823 12544 mRNA_4177: 12545 - K15356 VRG4, GONST1 GDP-mannose transporter, at 1,543,096 to 1,544,844 12545 mRNA_4178: 12546 - KOG1337 N-methyltransferase, at 1,545,010 to 1,546,616 12546 mRNA_4179: 12547 - KOG0429 Ubiquitin-conjugating enzyme-related protein Ft1, involved in programmed cell death, at 1,547,338 to 1,548,132 12547 mRNA_4180: 12548 - K03260 EIF4G translation initiation factor 4G, at 1,548,392 to 1,550,884 12548
Group Condition mRNA_4176 mRNA_4177 mRNA_4178 mRNA_4179 mRNA_4180
12544 12545 12546 12547 12548
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.3 -1.8 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.5 -0.7 N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.5 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.5 -0.1 N.D.
growth on ypd YPD N.D. N.D. -0.2 -0.3 N.D.
auxotrophy YNB Glucose N.D. N.D. -0.2 -0.3 N.D.
auxotrophy Dropout Complete N.D. N.D. -0.1 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.0 -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.1 -0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.2 +0.1 N.D.
growth on oleic acid YNB Glucose N.D. N.D. +0.0 -0.1 N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.0 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.3 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.4 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.2 +0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.0 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.3 +0.7 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.2 +0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.5 +0.3 N.D.
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