Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12546 and 12547 are separated by 721 nucleotides12547 and 12548 are separated by 259 nucleotides12548 and 12549 are separated by 337 nucleotides12549 and 12550 are separated by 772 nucleotides mRNA_4178: 12546 - KOG1337 N-methyltransferase, at 1,545,010 to 1,546,616 12546 mRNA_4179: 12547 - KOG0429 Ubiquitin-conjugating enzyme-related protein Ft1, involved in programmed cell death, at 1,547,338 to 1,548,132 12547 mRNA_4180: 12548 - K03260 EIF4G translation initiation factor 4G, at 1,548,392 to 1,550,884 12548 mRNA_4181: 12549 - Hypothetical Protein, at 1,551,222 to 1,553,388 12549 mRNA_4182: 12550 - K13288 orn, REX2, REXO2 oligoribonuclease, at 1,554,161 to 1,555,375 12550
Group Condition mRNA_4178 mRNA_4179 mRNA_4180 mRNA_4181 mRNA_4182
12546 12547 12548 12549 12550
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -1.8 N.D. N.D. -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.7 N.D. N.D. +0.1
growth on ricinoleic acid YNB Glucose -0.5 -0.1 N.D. N.D. -0.0
growth on ypd YPD -0.2 -0.3 N.D. N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.6 N.D. N.D. -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.1 N.D. N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.1 N.D. N.D. +0.2
auxotrophy YNB Glucose -0.2 -0.3 N.D. N.D. +0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.1 N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.4 N.D. N.D. +0.3
growth on oleic acid YNB Glucose +0.0 -0.1 N.D. N.D. +0.0
auxotrophy Dropout Complete -0.1 -0.3 N.D. N.D. +0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.5 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.6 N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.2 N.D. N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.3 N.D. N.D. -0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.4 N.D. N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.7 N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.1 N.D. N.D. +0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.4 N.D. N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.0 N.D. N.D. +0.7
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