Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12552 and 12553 are separated by 845 nucleotides
12553 and 12554 are separated by 558 nucleotides
12554 and 12555 are separated by 334 nucleotides
12555 and 12556 are separated by 167 nucleotides
mRNA_4184: 12552 - K20989 DUR3 urea-proton symporter, at 1,558,379 to 1,561,248
12552
mRNA_4185: 12553 - KOG1212 Amidases, at 1,562,094 to 1,563,941
12553
mRNA_4186: 12554 - KOG2806 Chitinase, at 1,564,500 to 1,566,078
12554
mRNA_4187: 12555 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 1,566,413 to 1,568,898
12555
mRNA_4188: 12556 - KOG4372 Predicted alpha/beta hydrolase, at 1,569,066 to 1,571,020
12556
Group
Condition
mRNA
_4184
mRNA
_4185
mRNA
_4186
mRNA
_4187
mRNA
_4188
12552
12553
12554
12555
12556
growth on oleic acid
YNB Oleic Acid
-0.3
+0.2
-0.9
-1.5
-0.1
growth on oleic acid
YNB Glucose
-0.3
-0.0
-0.4
-1.1
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.0
-1.8
-0.3
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.0
-1.4
-0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
+0.1
-0.5
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.2
-1.1
-0.7
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.3
-0.6
-0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.4
-0.6
-0.8
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.3
-0.9
-0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
-0.1
+0.0
-0.7
auxotrophy
Dropout Complete
-0.3
-0.2
+0.3
-0.4
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.3
-1.0
+0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.4
-0.5
+0.8
-0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.3
+0.5
-0.6
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.1
+0.0
-0.4
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
-0.4
-0.4
+0.3
growth on ricinoleic acid
YNB Glucose
-0.2
+0.4
+0.2
-0.2
-0.1
auxotrophy
YNB Glucose
-0.0
+0.1
+0.6
-0.3
-0.3
growth on ypd
YPD
-0.2
+0.0
+1.2
-0.4
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
-0.1
+0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.3
+0.2
+0.3
+0.1
remove
mRNA_4184
plot
remove
mRNA_4185
plot
remove
mRNA_4186
remove
mRNA_4187
plot
remove
mRNA_4188
plot