Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12552 and 12553 are separated by 845 nucleotides12553 and 12554 are separated by 558 nucleotides12554 and 12555 are separated by 334 nucleotides12555 and 12556 are separated by 167 nucleotides mRNA_4184: 12552 - K20989 DUR3 urea-proton symporter, at 1,558,379 to 1,561,248 12552 mRNA_4185: 12553 - KOG1212 Amidases, at 1,562,094 to 1,563,941 12553 mRNA_4186: 12554 - KOG2806 Chitinase, at 1,564,500 to 1,566,078 12554 mRNA_4187: 12555 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 1,566,413 to 1,568,898 12555 mRNA_4188: 12556 - KOG4372 Predicted alpha/beta hydrolase, at 1,569,066 to 1,571,020 12556
Group Condition mRNA_4184 mRNA_4185 mRNA_4186 mRNA_4187 mRNA_4188
12552 12553 12554 12555 12556
growth on oleic acid YNB Oleic Acid -0.3 +0.2 -0.9 -1.5 -0.1
growth on oleic acid YNB Glucose -0.3 -0.0 -0.4 -1.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 -1.8 -0.3 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.0 -1.4 -0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 +0.1 -0.5 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.2 -1.1 -0.7 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.3 -0.6 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.4 -0.6 -0.8 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.3 -0.9 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.1 +0.0 -0.7
auxotrophy Dropout Complete -0.3 -0.2 +0.3 -0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.3 -1.0 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.4 -0.5 +0.8 -0.8
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.3 +0.5 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1 +0.0 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 -0.4 -0.4 +0.3
growth on ricinoleic acid YNB Glucose -0.2 +0.4 +0.2 -0.2 -0.1
auxotrophy YNB Glucose -0.0 +0.1 +0.6 -0.3 -0.3
growth on ypd YPD -0.2 +0.0 +1.2 -0.4 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 -0.1 +0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.3 +0.2 +0.3 +0.1
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