Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12554 and 12555 are separated by 334 nucleotides12555 and 12556 are separated by 167 nucleotides12556 and 12557 are separated by 411 nucleotides12557 and 12558 are separated by 68 nucleotides mRNA_4186: 12554 - KOG2806 Chitinase, at 1,564,500 to 1,566,078 12554 mRNA_4187: 12555 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 1,566,413 to 1,568,898 12555 mRNA_4188: 12556 - KOG4372 Predicted alpha/beta hydrolase, at 1,569,066 to 1,571,020 12556 mRNA_4189: 12557 - Hypothetical Protein, at 1,571,432 to 1,574,972 12557 mRNA_4190: 12558 - Hypothetical Protein, at 1,575,041 to 1,575,964 12558
Group Condition mRNA_4186 mRNA_4187 mRNA_4188 mRNA_4189 mRNA_4190
12554 12555 12556 12557 12558
facs on lipid accumulation Sorted High BODIPY Gate -1.8 -0.3 +0.3 N.D. -1.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.4 -0.0 -0.4 N.D. -0.7
growth on oleic acid YNB Oleic Acid -0.9 -1.5 -0.1 N.D. +0.5
facs on lipid accumulation Sorted No BODIPY Gate -1.0 +0.1 -0.1 N.D. -1.0
growth on oleic acid YNB Glucose -0.4 -1.1 -0.4 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.8 -0.8 N.D. -1.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.8 +0.2 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 -0.7 +0.5 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 -0.2 +0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.4 -0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.4 +0.3 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.7 N.D. +0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.5 -0.4 N.D. +0.4
growth on ricinoleic acid YNB Glucose +0.2 -0.2 -0.1 N.D. -0.2
auxotrophy Dropout Complete +0.3 -0.4 -0.2 N.D. +0.2
growth on ypd YPD +1.2 -0.4 -0.2 N.D. -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.4 -0.2 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.4 +0.1 N.D. +0.8
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.3 +0.1 N.D. +0.0
auxotrophy YNB Glucose +0.6 -0.3 -0.3 N.D. +0.6
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.6 -0.1 N.D. +1.0
remove
mRNA_4186
plot
remove
mRNA_4187
plot
remove
mRNA_4188
remove
mRNA_4189
plot
remove
mRNA_4190
plot