Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12555 and 12556 are separated by 167 nucleotides12556 and 12557 are separated by 411 nucleotides12557 and 12558 are separated by 68 nucleotides12558 and 12559 are separated by 1045 nucleotides mRNA_4187: 12555 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 1,566,413 to 1,568,898 12555 mRNA_4188: 12556 - KOG4372 Predicted alpha/beta hydrolase, at 1,569,066 to 1,571,020 12556 mRNA_4189: 12557 - Hypothetical Protein, at 1,571,432 to 1,574,972 12557 mRNA_4190: 12558 - Hypothetical Protein, at 1,575,041 to 1,575,964 12558 mRNA_4191: 12559 - HMMPfam-GAF domain-PF13492,SMART-Domain present in phytochromes and cGMP-specific phosphodiesterases.-SM00065,SUPERFAMILY--SSF55781, at 1,577,010 to 1,579,239 12559
Group Condition mRNA_4187 mRNA_4188 mRNA_4189 mRNA_4190 mRNA_4191
12555 12556 12557 12558 12559
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 -0.8 N.D. -1.2 -0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.4 N.D. -0.7 -0.1
growth on oleic acid YNB Oleic Acid -1.5 -0.1 N.D. +0.5 -0.1
growth on oleic acid YNB Glucose -1.1 -0.4 N.D. +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 +0.2 N.D. -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 N.D. -1.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 +0.5 N.D. -0.1 -0.5
growth on ypd YPD -0.4 -0.2 N.D. -0.3 +0.3
growth on ricinoleic acid YNB Glucose -0.2 -0.1 N.D. -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.3 N.D. -1.1 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.7 N.D. +0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.3 N.D. -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1 N.D. +0.3 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.4 N.D. +0.4 +0.5
auxotrophy YNB Glucose -0.3 -0.3 N.D. +0.6 +0.0
auxotrophy Dropout Complete -0.4 -0.2 N.D. +0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 N.D. +0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.2 N.D. +0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.1 N.D. +0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.1 N.D. +1.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.1 N.D. +0.8 +0.0
remove
mRNA_4187
plot
remove
mRNA_4188
plot
remove
mRNA_4189
remove
mRNA_4190
plot
remove
mRNA_4191
plot