Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12564 and 12565 are separated by 378 nucleotides
12565 and 12566 are separated by 49 nucleotides
12566 and 12567 are separated by 384 nucleotides
12567 and 12568 are separated by 501 nucleotides
mRNA_4196: 12564 - K12343 SRD5A1 3-oxo-5-alpha-steroid 4-dehydrogenase 1, at 1,586,838 to 1,587,953
12564
mRNA_4197: 12565 - K00512 CYP17A steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone deacetylase, at 1,588,332 to 1,590,437
12565
mRNA_4198: 12566 - K00166 BCKDHA, bkdA1 2-oxoisovalerate dehydrogenase E1 component alpha subunit, at 1,590,487 to 1,592,266
12566
mRNA_4199: 12567 - KOG1303 Amino acid transporters, at 1,592,651 to 1,594,788
12567
mRNA_4200: 12568 - Hypothetical Protein, at 1,595,290 to 1,595,787
12568
Group
Condition
mRNA
_4196
mRNA
_4197
mRNA
_4198
mRNA
_4199
mRNA
_4200
12564
12565
12566
12567
12568
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.7
-0.3
-0.3
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.7
-0.3
+0.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.4
-0.3
+0.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.3
+0.2
-0.4
-0.0
growth on oleic acid
YNB Glucose
+0.0
-0.3
-0.3
-0.3
+0.3
auxotrophy
YNB Glucose
-0.3
-0.0
-0.2
-0.1
+0.1
auxotrophy
Dropout Complete
-0.0
+0.1
-0.5
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.2
-0.2
+0.2
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.0
+0.0
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.3
-0.1
+0.2
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
-0.3
+0.1
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.4
-0.1
+0.1
-0.1
growth on oleic acid
YNB Oleic Acid
+0.6
-0.2
-0.6
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.1
-0.1
+0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.1
+0.4
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.2
+0.5
+0.3
+0.1
growth on ypd
YPD
+0.2
-0.1
+0.4
+0.0
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.8
+0.7
+0.4
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.6
+0.4
-0.0
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.1
+0.5
+0.0
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.8
+0.3
+0.2
+0.2
remove
mRNA_4196
plot
remove
mRNA_4197
plot
remove
mRNA_4198
remove
mRNA_4199
plot
remove
mRNA_4200
plot