Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12565 and 12566 are separated by 49 nucleotides12566 and 12567 are separated by 384 nucleotides12567 and 12568 are separated by 501 nucleotides12568 and 12569 are separated by 405 nucleotides mRNA_4197: 12565 - K00512 CYP17A steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone deacetylase, at 1,588,332 to 1,590,437 12565 mRNA_4198: 12566 - K00166 BCKDHA, bkdA1 2-oxoisovalerate dehydrogenase E1 component alpha subunit, at 1,590,487 to 1,592,266 12566 mRNA_4199: 12567 - KOG1303 Amino acid transporters, at 1,592,651 to 1,594,788 12567 mRNA_4200: 12568 - Hypothetical Protein, at 1,595,290 to 1,595,787 12568 mRNA_4201: 12569 - K02913 RP-L33, MRPL33, rpmG large subunit ribosomal protein L33, at 1,596,193 to 1,596,692 12569
Group Condition mRNA_4197 mRNA_4198 mRNA_4199 mRNA_4200 mRNA_4201
12565 12566 12567 12568 12569
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.3 +0.0 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.3 -0.3 +0.4 N.D.
growth on oleic acid YNB Glucose -0.3 -0.3 -0.3 +0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.2 -0.6 -0.1 +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.2 -0.4 -0.0 N.D.
auxotrophy Dropout Complete +0.1 -0.5 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.3 +0.2 +0.0 N.D.
auxotrophy YNB Glucose -0.0 -0.2 -0.1 +0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.3 +0.1 +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1 +0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 +0.1 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 +0.2 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.0 +0.0 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.1 +0.1 -0.1 N.D.
growth on ypd YPD -0.1 +0.4 +0.0 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.4 -0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.5 +0.3 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.5 +0.0 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.6 +0.4 -0.0 -0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 +0.7 +0.4 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.8 +0.3 +0.2 +0.2 N.D.
remove
mRNA_4197
plot
remove
mRNA_4198
plot
remove
mRNA_4199
remove
mRNA_4200
plot
remove
mRNA_4201
plot