Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12566 and 12567 are separated by 384 nucleotides12567 and 12568 are separated by 501 nucleotides12568 and 12569 are separated by 405 nucleotides12569 and 12570 are separated by 393 nucleotides mRNA_4198: 12566 - K00166 BCKDHA, bkdA1 2-oxoisovalerate dehydrogenase E1 component alpha subunit, at 1,590,487 to 1,592,266 12566 mRNA_4199: 12567 - KOG1303 Amino acid transporters, at 1,592,651 to 1,594,788 12567 mRNA_4200: 12568 - Hypothetical Protein, at 1,595,290 to 1,595,787 12568 mRNA_4201: 12569 - K02913 RP-L33, MRPL33, rpmG large subunit ribosomal protein L33, at 1,596,193 to 1,596,692 12569 mRNA_4202: 12570 - K00249 ACADM, acd acyl-CoA dehydrogenase, at 1,597,086 to 1,599,409 12570
Group Condition mRNA_4198 mRNA_4199 mRNA_4200 mRNA_4201 mRNA_4202
12566 12567 12568 12569 12570
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.4 -0.0 N.D. -0.9
growth on oleic acid YNB Oleic Acid -0.6 -0.1 +0.3 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 +0.4 N.D. -0.4
auxotrophy Dropout Complete -0.5 -0.1 +0.1 N.D. -0.0
growth on oleic acid YNB Glucose -0.3 -0.3 +0.3 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.1 +0.2 N.D. -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.0 -0.0 N.D. -0.1
auxotrophy YNB Glucose -0.2 -0.1 +0.1 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.2 +0.0 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.1 -0.1 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.0 +0.2 N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.1 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 +0.2 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.2 +0.3 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 +0.1 N.D. +0.2
growth on ypd YPD +0.4 +0.0 -0.0 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.0 -0.0 N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.0 +0.2 N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 +0.4 -0.4 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.3 +0.1 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.2 +0.2 N.D. +0.4
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