Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12568 and 12569 are separated by 405 nucleotides12569 and 12570 are separated by 393 nucleotides12570 and 12571 are separated by 2100 nucleotides12571 and 12572 are separated by 256 nucleotides mRNA_4200: 12568 - Hypothetical Protein, at 1,595,290 to 1,595,787 12568 mRNA_4201: 12569 - K02913 RP-L33, MRPL33, rpmG large subunit ribosomal protein L33, at 1,596,193 to 1,596,692 12569 mRNA_4202: 12570 - K00249 ACADM, acd acyl-CoA dehydrogenase, at 1,597,086 to 1,599,409 12570 mRNA_4203: 12571 - K19842 ROM1_2 RHO1 GDP-GTP exchange protein 1/2, at 1,601,510 to 1,605,241 12571 mRNA_4204: 12572 - K15292 STXBP1, MUNC18-1 syntaxin-binding protein 1, at 1,605,498 to 1,608,617 12572
Group Condition mRNA_4200 mRNA_4201 mRNA_4202 mRNA_4203 mRNA_4204
12568 12569 12570 12571 12572
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -0.9 -3.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. -0.9 -3.3 N.D.
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.2 -2.7 N.D.
auxotrophy YNB Glucose +0.1 N.D. +0.0 -1.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. -0.1 -0.9 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. +0.1 -0.7 N.D.
growth on oleic acid YNB Glucose +0.3 N.D. -0.2 -0.8 N.D.
auxotrophy Dropout Complete +0.1 N.D. -0.0 -0.7 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. -0.1 -0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. -0.0 -0.7 N.D.
growth on oleic acid YNB Oleic Acid +0.3 N.D. -0.4 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. +0.0 -0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. -0.4 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.4 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. +0.2 -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +0.3 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.0 +0.1 N.D.
growth on ypd YPD -0.0 N.D. +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +0.1 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.4 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. +0.0 +0.6 N.D.
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