Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12569 and 12570 are separated by 393 nucleotides
12570 and 12571 are separated by 2100 nucleotides
12571 and 12572 are separated by 256 nucleotides
12572 and 12573 are separated by 677 nucleotides
mRNA_4201: 12569 - K02913 RP-L33, MRPL33, rpmG large subunit ribosomal protein L33, at 1,596,193 to 1,596,692
12569
mRNA_4202: 12570 - K00249 ACADM, acd acyl-CoA dehydrogenase, at 1,597,086 to 1,599,409
12570
mRNA_4203: 12571 - K19842 ROM1_2 RHO1 GDP-GTP exchange protein 1/2, at 1,601,510 to 1,605,241
12571
mRNA_4204: 12572 - K15292 STXBP1, MUNC18-1 syntaxin-binding protein 1, at 1,605,498 to 1,608,617
12572
mRNA_4205: 12573 - K09276 YBX1, NSEP1 Y-box-binding protein 1, at 1,609,295 to 1,611,072
12573
Group
Condition
mRNA
_4201
mRNA
_4202
mRNA
_4203
mRNA
_4204
mRNA
_4205
12569
12570
12571
12572
12573
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.9
-3.3
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.9
-3.2
N.D.
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
-0.2
-2.7
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.9
N.D.
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
-0.7
N.D.
-0.3
growth on oleic acid
YNB Glucose
N.D.
-0.2
-0.8
N.D.
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.4
-0.1
N.D.
+0.0
auxotrophy
YNB Glucose
N.D.
+0.0
-1.4
N.D.
+0.9
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
-0.5
N.D.
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.4
-0.2
N.D.
+0.3
growth on ypd
YPD
N.D.
+0.1
+0.1
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
-0.4
N.D.
-0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
-0.7
N.D.
+0.6
auxotrophy
Dropout Complete
N.D.
-0.0
-0.7
N.D.
+0.7
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.0
-0.5
N.D.
+0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.4
-0.3
N.D.
+0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.3
-0.1
N.D.
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.0
+0.1
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
+0.4
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.0
+0.6
N.D.
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.4
+0.0
N.D.
+0.2
remove
mRNA_4201
plot
remove
mRNA_4202
plot
remove
mRNA_4203
remove
mRNA_4204
plot
remove
mRNA_4205
plot