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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12573 and 12574 are separated by 75 nucleotides
12574 and 12575 overlap by 29 nucleotides
12575 and 12576 are separated by 404 nucleotides
12576 and 12577 are separated by 184 nucleotides
mRNA_4205: 12573 - K09276 YBX1, NSEP1 Y-box-binding protein 1, at 1,609,295 to 1,611,072
12573
mRNA_4206: 12574 - Hypothetical Protein, at 1,611,148 to 1,611,771
12574
mRNA_4207: 12575 - BLAST similar to An07g08470 [Aspergillus kawachii IFO 4308], at 1,611,743 to 1,613,207
12575
mRNA_4208: 12576 - K17919 SNX4 sorting nexin-4, at 1,613,612 to 1,615,514
12576
mRNA_4209: 12577 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1,615,699 to 1,618,403
12577
Group
Condition
mRNA
_4205
mRNA
_4206
mRNA
_4207
mRNA
_4208
mRNA
_4209
12573
12574
12575
12576
12577
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.1
+0.2
-1.8
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.2
-0.5
-0.5
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
-0.4
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.2
-0.2
-0.7
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.2
-0.2
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.4
-0.1
-0.8
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.1
-0.3
+0.4
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.2
+0.2
-0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.5
+0.1
-0.1
-1.0
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
+0.2
-0.1
+0.3
+0.1
growth on oleic acid
YNB Glucose
+0.3
-0.0
+0.0
-0.2
+0.2
growth on ypd
YPD
-0.5
+0.4
-0.0
+0.2
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
+0.4
-0.2
-0.1
auxotrophy
Dropout Complete
+0.7
+0.0
-0.6
-0.3
+0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.2
+0.3
-0.1
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.0
+0.0
+0.2
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.1
+0.4
-0.0
-0.1
growth on oleic acid
YNB Oleic Acid
+0.3
+0.1
+0.2
-0.0
+0.2
auxotrophy
YNB Glucose
+0.9
+0.1
-0.0
-0.6
+0.5
growth on ricinoleic acid
YNB Glucose
+0.4
+0.1
+0.2
+0.3
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.6
+0.3
+0.2
-0.4
+0.5
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