Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12573 and 12574 are separated by 75 nucleotides12574 and 12575 overlap by 29 nucleotides12575 and 12576 are separated by 404 nucleotides12576 and 12577 are separated by 184 nucleotides mRNA_4205: 12573 - K09276 YBX1, NSEP1 Y-box-binding protein 1, at 1,609,295 to 1,611,072 12573 mRNA_4206: 12574 - Hypothetical Protein, at 1,611,148 to 1,611,771 12574 mRNA_4207: 12575 - BLAST similar to An07g08470 [Aspergillus kawachii IFO 4308], at 1,611,743 to 1,613,207 12575 mRNA_4208: 12576 - K17919 SNX4 sorting nexin-4, at 1,613,612 to 1,615,514 12576 mRNA_4209: 12577 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1,615,699 to 1,618,403 12577
Group Condition mRNA_4205 mRNA_4206 mRNA_4207 mRNA_4208 mRNA_4209
12573 12574 12575 12576 12577
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.1 +0.2 -1.8 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.2 -0.5 -0.5 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 -0.4 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.2 -0.2 -0.7 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 -0.2 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.4 -0.1 -0.8 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.1 -0.3 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 +0.2 -0.4 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.1 -0.1 -1.0 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.2 -0.1 +0.3 +0.1
growth on oleic acid YNB Glucose +0.3 -0.0 +0.0 -0.2 +0.2
growth on ypd YPD -0.5 +0.4 -0.0 +0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 +0.4 -0.2 -0.1
auxotrophy Dropout Complete +0.7 +0.0 -0.6 -0.3 +0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.2 +0.3 -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.0 +0.0 +0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.1 +0.4 -0.0 -0.1
growth on oleic acid YNB Oleic Acid +0.3 +0.1 +0.2 -0.0 +0.2
auxotrophy YNB Glucose +0.9 +0.1 -0.0 -0.6 +0.5
growth on ricinoleic acid YNB Glucose +0.4 +0.1 +0.2 +0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.6 +0.3 +0.2 -0.4 +0.5
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