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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12574 and 12575 overlap by 29 nucleotides
12575 and 12576 are separated by 404 nucleotides
12576 and 12577 are separated by 184 nucleotides
12577 and 12578 are separated by 392 nucleotides
mRNA_4206: 12574 - Hypothetical Protein, at 1,611,148 to 1,611,771
12574
mRNA_4207: 12575 - BLAST similar to An07g08470 [Aspergillus kawachii IFO 4308], at 1,611,743 to 1,613,207
12575
mRNA_4208: 12576 - K17919 SNX4 sorting nexin-4, at 1,613,612 to 1,615,514
12576
mRNA_4209: 12577 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1,615,699 to 1,618,403
12577
mRNA_4210: 12578 - K19985 EXOC6, SEC15 exocyst complex component 6, at 1,618,796 to 1,621,938
12578
Group
Condition
mRNA
_4206
mRNA
_4207
mRNA
_4208
mRNA
_4209
mRNA
_4210
12574
12575
12576
12577
12578
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.2
-1.8
-0.1
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.5
-0.5
-0.0
-0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.1
-0.8
+0.2
-0.8
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.4
-0.2
-0.1
-1.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.4
-0.2
+0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.1
-1.0
+0.5
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.2
-0.7
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.2
-0.4
+0.1
-0.5
auxotrophy
Dropout Complete
+0.0
-0.6
-0.3
+0.7
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.2
-0.2
+0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.3
+0.4
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.1
+0.3
+0.1
-0.7
growth on oleic acid
YNB Glucose
-0.0
+0.0
-0.2
+0.2
-0.1
auxotrophy
YNB Glucose
+0.1
-0.0
-0.6
+0.5
-0.2
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
-0.0
+0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.2
-0.4
+0.5
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.4
-0.0
-0.1
-0.1
growth on ypd
YPD
+0.4
-0.0
+0.2
+0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
+0.2
+0.2
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.2
+0.3
+0.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.3
-0.1
+0.0
+0.4
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