Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12576 and 12577 are separated by 184 nucleotides12577 and 12578 are separated by 392 nucleotides12578 and 12579 are separated by 180 nucleotides12579 and 12580 are separated by 285 nucleotides mRNA_4208: 12576 - K17919 SNX4 sorting nexin-4, at 1,613,612 to 1,615,514 12576 mRNA_4209: 12577 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1,615,699 to 1,618,403 12577 mRNA_4210: 12578 - K19985 EXOC6, SEC15 exocyst complex component 6, at 1,618,796 to 1,621,938 12578 mRNA_4211: 12579 - Hypothetical Protein, at 1,622,119 to 1,623,170 12579 mRNA_4212: 12580 - KOG1968 Replication factor C, subunit RFC1 (large subunit), at 1,623,456 to 1,625,668 12580
Group Condition mRNA_4208 mRNA_4209 mRNA_4210 mRNA_4211 mRNA_4212
12576 12577 12578 12579 12580
facs on lipid accumulation Sorted Low BODIPY Gate -1.8 -0.1 -0.7 -1.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 -1.2 -0.8 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -0.3 -2.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.1 -0.3 -1.8 -0.4
auxotrophy YNB Glucose 75mM Methionine -1.0 +0.5 -0.2 -0.7 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.0 -0.8 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.3 -0.2 -0.6 -0.1
auxotrophy Dropout Complete -0.3 +0.7 -0.1 -1.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 +0.2 -0.8 +0.3 +0.3
auxotrophy YNB Glucose -0.6 +0.5 -0.2 -0.6 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.5 -0.4 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.1 -0.7 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.1 -0.5 +0.3 +0.1
growth on ricinoleic acid YNB Glucose +0.3 +0.0 -0.0 -0.9 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.0 +0.4 -1.1 +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 +0.2 -0.5 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.1 -0.1 -0.5 +0.3
growth on oleic acid YNB Glucose -0.2 +0.2 -0.1 -0.2 +0.1
growth on oleic acid YNB Oleic Acid -0.0 +0.2 -0.3 -0.3 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 +0.1 -0.4 +0.2
growth on ypd YPD +0.2 +0.2 -0.2 +0.1 +0.1
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