Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12577 and 12578 are separated by 392 nucleotides12578 and 12579 are separated by 180 nucleotides12579 and 12580 are separated by 285 nucleotides12580 and 12581 are separated by 133 nucleotides mRNA_4209: 12577 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1,615,699 to 1,618,403 12577 mRNA_4210: 12578 - K19985 EXOC6, SEC15 exocyst complex component 6, at 1,618,796 to 1,621,938 12578 mRNA_4211: 12579 - Hypothetical Protein, at 1,622,119 to 1,623,170 12579 mRNA_4212: 12580 - KOG1968 Replication factor C, subunit RFC1 (large subunit), at 1,623,456 to 1,625,668 12580 mRNA_4213: 12581 - K01673 cynT, can carbonic anhydrase, at 1,625,802 to 1,627,146 12581
Group Condition mRNA_4209 mRNA_4210 mRNA_4211 mRNA_4212 mRNA_4213
12577 12578 12579 12580 12581
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.3 -1.8 -0.4 -2.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.7 -1.3 -0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.4 -1.1 +0.5 -1.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 -0.5 +0.3 -1.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.7 -0.4 +0.2 -0.9
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.3 -2.1 +0.1 +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.8 +0.1 -0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -1.2 -0.8 -0.0 +0.7
growth on ricinoleic acid YNB Glucose +0.0 -0.0 -0.9 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.8 +0.3 +0.3 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.2 -0.6 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.5 +0.3 +0.1 -0.2
growth on oleic acid YNB Oleic Acid +0.2 -0.3 -0.3 +0.4 -0.1
growth on ypd YPD +0.2 -0.2 +0.1 +0.1 -0.1
auxotrophy Dropout Complete +0.7 -0.1 -1.4 +0.2 +0.9
growth on oleic acid YNB Glucose +0.2 -0.1 -0.2 +0.1 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.4 +0.2 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 -0.5 +0.1 +0.7
auxotrophy YNB Glucose +0.5 -0.2 -0.6 +0.1 +1.5
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.4 -0.3 -0.0 +1.6
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.2 -0.7 -0.1 +2.1
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