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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12578 and 12579 are separated by 180 nucleotides
12579 and 12580 are separated by 285 nucleotides
12580 and 12581 are separated by 133 nucleotides
12581 and 12582 are separated by 457 nucleotides
mRNA_4210: 12578 - K19985 EXOC6, SEC15 exocyst complex component 6, at 1,618,796 to 1,621,938
12578
mRNA_4211: 12579 - Hypothetical Protein, at 1,622,119 to 1,623,170
12579
mRNA_4212: 12580 - KOG1968 Replication factor C, subunit RFC1 (large subunit), at 1,623,456 to 1,625,668
12580
mRNA_4213: 12581 - K01673 cynT, can carbonic anhydrase, at 1,625,802 to 1,627,146
12581
mRNA_4214: 12582 - Hypothetical Protein, at 1,627,604 to 1,628,234
12582
Group
Condition
mRNA
_4210
mRNA
_4211
mRNA
_4212
mRNA
_4213
mRNA
_4214
12578
12579
12580
12581
12582
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-1.8
-0.4
-2.3
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.4
+0.2
-0.9
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.5
+0.3
-1.6
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-1.1
+0.5
-1.7
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
-1.3
-0.3
+0.2
+0.4
ypd buoyancy
40 hrs High Buoyancy
-0.3
-2.1
+0.1
+0.5
+0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.9
+0.2
-0.4
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.6
-0.1
+0.2
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
+0.1
-0.1
-0.5
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-1.2
-0.8
-0.0
+0.7
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
+0.3
+0.3
-0.4
-0.2
auxotrophy
Dropout Complete
-0.1
-1.4
+0.2
+0.9
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
+0.3
+0.1
-0.2
-0.3
growth on oleic acid
YNB Oleic Acid
-0.3
-0.3
+0.4
-0.1
+0.2
growth on ypd
YPD
-0.2
+0.1
+0.1
-0.1
+0.2
growth on oleic acid
YNB Glucose
-0.1
-0.2
+0.1
+0.4
-0.0
auxotrophy
YNB Glucose
-0.2
-0.6
+0.1
+1.5
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.4
+0.2
+0.5
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.3
-0.0
+1.6
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.5
+0.1
+0.7
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.7
-0.1
+2.1
+0.0
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