Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12579 and 12580 are separated by 285 nucleotides12580 and 12581 are separated by 133 nucleotides12581 and 12582 are separated by 457 nucleotides12582 and 12583 are separated by 704 nucleotides mRNA_4211: 12579 - Hypothetical Protein, at 1,622,119 to 1,623,170 12579 mRNA_4212: 12580 - KOG1968 Replication factor C, subunit RFC1 (large subunit), at 1,623,456 to 1,625,668 12580 mRNA_4213: 12581 - K01673 cynT, can carbonic anhydrase, at 1,625,802 to 1,627,146 12581 mRNA_4214: 12582 - Hypothetical Protein, at 1,627,604 to 1,628,234 12582 mRNA_4215: 12583 - HMMPfam-RhoGAP domain-PF00620,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-Fes/CIP4 homology domain-SM00055,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF48350, at 1,628,939 to 1,632,484 12583
Group Condition mRNA_4211 mRNA_4212 mRNA_4213 mRNA_4214 mRNA_4215
12579 12580 12581 12582 12583
ypd buoyancy 40 hrs No Buoyancy Separation -1.8 -0.4 -2.3 +0.3 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.3 -1.6 -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 +0.5 -1.7 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.2 -0.9 -0.7 +0.1
ypd buoyancy 40 hrs High Buoyancy -2.1 +0.1 +0.5 +0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.9 +0.2 -0.4 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.1 +0.2 -0.4 -0.0
auxotrophy Dropout Complete -1.4 +0.2 +0.9 -0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 -0.3 +0.2 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.1 -0.2 -0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 -0.5 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.3 -0.4 -0.2 -0.0
growth on oleic acid YNB Oleic Acid -0.3 +0.4 -0.1 +0.2 -0.1
growth on oleic acid YNB Glucose -0.2 +0.1 +0.4 -0.0 +0.0
growth on ypd YPD +0.1 +0.1 -0.1 +0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.2 +0.5 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.8 -0.0 +0.7 +0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.1 +0.7 +0.3 +0.0
auxotrophy YNB Glucose -0.6 +0.1 +1.5 -0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.1 +2.1 +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.0 +1.6 -0.1 -0.0
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