Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12580 and 12581 are separated by 133 nucleotides12581 and 12582 are separated by 457 nucleotides12582 and 12583 are separated by 704 nucleotides12583 and 12584 are separated by 148 nucleotides mRNA_4212: 12580 - KOG1968 Replication factor C, subunit RFC1 (large subunit), at 1,623,456 to 1,625,668 12580 mRNA_4213: 12581 - K01673 cynT, can carbonic anhydrase, at 1,625,802 to 1,627,146 12581 mRNA_4214: 12582 - Hypothetical Protein, at 1,627,604 to 1,628,234 12582 mRNA_4215: 12583 - HMMPfam-RhoGAP domain-PF00620,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-Fes/CIP4 homology domain-SM00055,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF48350, at 1,628,939 to 1,632,484 12583 mRNA_4216: 12584 - K13123 GPATCH1 G patch domain-containing protein 1, at 1,632,633 to 1,635,917 12584
Group Condition mRNA_4212 mRNA_4213 mRNA_4214 mRNA_4215 mRNA_4216
12580 12581 12582 12583 12584
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -1.6 -0.3 -0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -2.3 +0.3 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.9 -0.7 +0.1 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -1.7 +0.2 +0.1 -0.3
growth on ricinoleic acid YNB Glucose +0.2 -0.4 +0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 -0.4 -0.0 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.5 +0.3 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 -0.3 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.4 -0.2 -0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.2 +0.4 +0.3 -0.5
auxotrophy Dropout Complete +0.2 +0.9 -0.4 -0.1 -0.3
growth on oleic acid YNB Oleic Acid +0.4 -0.1 +0.2 -0.1 -0.1
growth on oleic acid YNB Glucose +0.1 +0.4 -0.0 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.5 +0.2 +0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.5 +0.1 +0.1 -0.1
growth on ypd YPD +0.1 -0.1 +0.2 +0.0 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.7 +0.3 +0.0 -0.3
auxotrophy YNB Glucose +0.1 +1.5 -0.3 -0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 +1.6 -0.1 -0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.7 +0.3 +0.2 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 +2.1 +0.0 -0.1 -0.2
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