Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12583 and 12584 are separated by 148 nucleotides12584 and 12585 are separated by 318 nucleotides12585 and 12586 are separated by 517 nucleotides12586 and 12587 are separated by 124 nucleotides mRNA_4215: 12583 - HMMPfam-RhoGAP domain-PF00620,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-Fes/CIP4 homology domain-SM00055,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF48350, at 1,628,939 to 1,632,484 12583 mRNA_4216: 12584 - K13123 GPATCH1 G patch domain-containing protein 1, at 1,632,633 to 1,635,917 12584 mRNA_4217: 12585 - K14830 MAK11, PAK1IP1 protein MAK11, at 1,636,236 to 1,637,979 12585 mRNA_4218: 12586 - K17491 SMEK, PPP4R3 protein phosphatase 4 regulatory subunit 3, at 1,638,497 to 1,642,867 12586 mRNA_4219: 12587 - HMMPfam-Protein phosphatase inhibitor 2 (IPP-2)-PF04979, at 1,642,992 to 1,644,310 12587
Group Condition mRNA_4215 mRNA_4216 mRNA_4217 mRNA_4218 mRNA_4219
12583 12584 12585 12586 12587
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.5 N.D. -0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.4 N.D. -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.1 N.D. -0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.2 N.D. -0.1 -0.9
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 N.D. -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.0 N.D. -0.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.3 N.D. -0.4 +0.3
auxotrophy YNB Glucose -0.0 -0.4 N.D. +0.2 +0.0
auxotrophy Dropout Complete -0.1 -0.3 N.D. +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 N.D. -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.3 N.D. +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 N.D. -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.1 N.D. -0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.4 N.D. +0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 N.D. -0.4 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1 N.D. -0.1 +0.3
growth on oleic acid YNB Glucose +0.0 -0.1 N.D. +0.1 +0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.1 N.D. +0.3 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.5 N.D. +0.8 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.4 N.D. +0.1 +0.3
growth on ypd YPD +0.0 +0.4 N.D. +0.1 +0.5
remove
mRNA_4215
plot
remove
mRNA_4216
plot
remove
mRNA_4217
remove
mRNA_4218
plot
remove
mRNA_4219
plot