Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12587 and 12588 are separated by 231 nucleotides12588 and 12589 are separated by 168 nucleotides12589 and 12590 are separated by 68 nucleotides12590 and 12591 are separated by 52 nucleotides mRNA_4219: 12587 - HMMPfam-Protein phosphatase inhibitor 2 (IPP-2)-PF04979, at 1,642,992 to 1,644,310 12587 mRNA_4220: 12588 - K19932 NCS1 neuronal calcium sensor 1, at 1,644,542 to 1,645,935 12588 mRNA_4221: 12589 - HMMPfam-Sodium/hydrogen exchanger family-PF00999, at 1,646,104 to 1,647,809 12589 mRNA_4222: 12590 - K17969 FIS1, TTC11, MDV2 mitochondrial fission 1 protein, at 1,647,878 to 1,648,825 12590 mRNA_4223: 12591 - KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase, at 1,648,878 to 1,650,600 12591
Group Condition mRNA_4219 mRNA_4220 mRNA_4221 mRNA_4222 mRNA_4223
12587 12588 12589 12590 12591
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -3.5 -0.2 -0.3 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 -1.0 -0.0 -1.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.8 -0.1 -0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -1.3 +0.3 -0.9 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.7 -0.4 -0.0 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.5 +0.3 -1.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.7 +0.2 -0.7 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 +0.8 -0.4 -0.3 -0.2
growth on ricinoleic acid YNB Glucose +0.2 -0.3 -0.2 +0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 +0.1 -0.4 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.4 +0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.1 +0.2 -0.5 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 +0.3 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.7 +0.0 -0.0 +0.1
growth on oleic acid YNB Glucose +0.2 +0.3 -0.1 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.6 -0.0 +0.0 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 +0.2 -0.0 -0.2
auxotrophy YNB Glucose +0.0 +0.3 +0.0 +0.3 -0.1
growth on oleic acid YNB Oleic Acid +0.3 +0.2 -0.2 +0.1 +0.1
auxotrophy Dropout Complete +0.2 +0.7 -0.2 +0.3 -0.2
growth on ypd YPD +0.5 -0.2 +0.5 +0.1 +0.4
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