Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12588 and 12589 are separated by 168 nucleotides12589 and 12590 are separated by 68 nucleotides12590 and 12591 are separated by 52 nucleotides12591 and 12592 are separated by 78 nucleotides mRNA_4220: 12588 - K19932 NCS1 neuronal calcium sensor 1, at 1,644,542 to 1,645,935 12588 mRNA_4221: 12589 - HMMPfam-Sodium/hydrogen exchanger family-PF00999, at 1,646,104 to 1,647,809 12589 mRNA_4222: 12590 - K17969 FIS1, TTC11, MDV2 mitochondrial fission 1 protein, at 1,647,878 to 1,648,825 12590 mRNA_4223: 12591 - KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase, at 1,648,878 to 1,650,600 12591 mRNA_4224: 12592 - Hypothetical Protein, at 1,650,679 to 1,653,904 12592
Group Condition mRNA_4220 mRNA_4221 mRNA_4222 mRNA_4223 mRNA_4224
12588 12589 12590 12591 12592
growth on ricinoleic acid YNB Ricinoleic Acid -3.5 -0.2 -0.3 -0.5 +0.0
ypd buoyancy 40 hrs Low Buoyancy -1.0 -0.0 -1.2 -0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.4 -0.0 -0.5 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.1 -0.1 -0.5 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -1.3 +0.3 -0.9 -0.0 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.3 -1.2 -0.2 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.7 +0.2 -0.7 -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.4 -0.3 -0.5
growth on ricinoleic acid YNB Glucose -0.3 -0.2 +0.0 -0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.0 -0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 -0.4 -0.3 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 -0.5 +0.1 +0.1
growth on oleic acid YNB Glucose +0.3 -0.1 +0.0 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.3 +0.2 -0.0 -0.1
auxotrophy Dropout Complete +0.7 -0.2 +0.3 -0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.2 -0.0 -0.2 +0.1
auxotrophy YNB Glucose +0.3 +0.0 +0.3 -0.1 -0.1
growth on ypd YPD -0.2 +0.5 +0.1 +0.4 -0.4
growth on oleic acid YNB Oleic Acid +0.2 -0.2 +0.1 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.0 +0.0 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.0 -0.0 +0.1 +0.0
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