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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12589 and 12590 are separated by 68 nucleotides
12590 and 12591 are separated by 52 nucleotides
12591 and 12592 are separated by 78 nucleotides
12592 and 12593 are separated by 355 nucleotides
mRNA_4221: 12589 - HMMPfam-Sodium/hydrogen exchanger family-PF00999, at 1,646,104 to 1,647,809
12589
mRNA_4222: 12590 - K17969 FIS1, TTC11, MDV2 mitochondrial fission 1 protein, at 1,647,878 to 1,648,825
12590
mRNA_4223: 12591 - KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase, at 1,648,878 to 1,650,600
12591
mRNA_4224: 12592 - Hypothetical Protein, at 1,650,679 to 1,653,904
12592
mRNA_4225: 12593 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 1,654,260 to 1,655,493
12593
Group
Condition
mRNA
_4221
mRNA
_4222
mRNA
_4223
mRNA
_4224
mRNA
_4225
12589
12590
12591
12592
12593
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-1.2
-0.3
-0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.1
-0.5
-0.3
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.3
-0.5
+0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.4
-0.3
-0.5
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-1.2
-0.2
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.3
-0.2
-0.4
+0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.0
-0.5
-0.2
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.7
-0.2
+0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.9
-0.0
+0.3
-0.2
auxotrophy
Dropout Complete
-0.2
+0.3
-0.2
-0.3
+0.0
growth on ricinoleic acid
YNB Glucose
-0.2
+0.0
-0.2
-0.3
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.0
+0.0
-0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.2
-0.1
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.0
-0.2
+0.1
-0.1
auxotrophy
YNB Glucose
+0.0
+0.3
-0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.5
+0.1
+0.1
+0.3
growth on oleic acid
YNB Glucose
-0.1
+0.0
-0.1
-0.1
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.0
+0.1
+0.0
+0.3
growth on oleic acid
YNB Oleic Acid
-0.2
+0.1
+0.1
+0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.2
-0.0
-0.1
+0.1
growth on ypd
YPD
+0.5
+0.1
+0.4
-0.4
+0.2
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