Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12589 and 12590 are separated by 68 nucleotides12590 and 12591 are separated by 52 nucleotides12591 and 12592 are separated by 78 nucleotides12592 and 12593 are separated by 355 nucleotides mRNA_4221: 12589 - HMMPfam-Sodium/hydrogen exchanger family-PF00999, at 1,646,104 to 1,647,809 12589 mRNA_4222: 12590 - K17969 FIS1, TTC11, MDV2 mitochondrial fission 1 protein, at 1,647,878 to 1,648,825 12590 mRNA_4223: 12591 - KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase, at 1,648,878 to 1,650,600 12591 mRNA_4224: 12592 - Hypothetical Protein, at 1,650,679 to 1,653,904 12592 mRNA_4225: 12593 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 1,654,260 to 1,655,493 12593
Group Condition mRNA_4221 mRNA_4222 mRNA_4223 mRNA_4224 mRNA_4225
12589 12590 12591 12592 12593
ypd buoyancy 40 hrs Low Buoyancy -0.0 -1.2 -0.3 -0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1 -0.5 -0.3 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.3 -0.5 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.4 -0.3 -0.5 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -1.2 -0.2 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.3 -0.2 -0.4 +0.5
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.0 -0.5 -0.2 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.7 -0.2 +0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.9 -0.0 +0.3 -0.2
auxotrophy Dropout Complete -0.2 +0.3 -0.2 -0.3 +0.0
growth on ricinoleic acid YNB Glucose -0.2 +0.0 -0.2 -0.3 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.0 +0.0 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.2 -0.1 -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.0 -0.2 +0.1 -0.1
auxotrophy YNB Glucose +0.0 +0.3 -0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.5 +0.1 +0.1 +0.3
growth on oleic acid YNB Glucose -0.1 +0.0 -0.1 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.0 +0.1 +0.0 +0.3
growth on oleic acid YNB Oleic Acid -0.2 +0.1 +0.1 +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.2 -0.0 -0.1 +0.1
growth on ypd YPD +0.5 +0.1 +0.4 -0.4 +0.2
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