Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12591 and 12592 are separated by 78 nucleotides12592 and 12593 are separated by 355 nucleotides12593 and 12594 are separated by 319 nucleotides12594 and 12595 are separated by 207 nucleotides mRNA_4223: 12591 - KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase, at 1,648,878 to 1,650,600 12591 mRNA_4224: 12592 - Hypothetical Protein, at 1,650,679 to 1,653,904 12592 mRNA_4225: 12593 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 1,654,260 to 1,655,493 12593 mRNA_4226: 12594 - K00700 GBE1, glgB 1,4-alpha-glucan branching enzyme, at 1,655,813 to 1,659,134 12594 mRNA_4227: 12595 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF48452, at 1,659,342 to 1,664,294 12595
Group Condition mRNA_4223 mRNA_4224 mRNA_4225 mRNA_4226 mRNA_4227
12591 12592 12593 12594 12595
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 -0.3 -3.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.0 -0.1 -3.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 +0.2 -1.8 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.3 -0.5 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.5 +0.1 -0.5 +0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.3 +0.1 -1.5 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.3 -0.2 -0.6 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.2 -0.2 -0.4 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.3 -0.2 -0.5 +0.0
growth on ypd YPD +0.4 -0.4 +0.2 -0.5 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.0 -0.2 +0.0 +0.0
auxotrophy Dropout Complete -0.2 -0.3 +0.0 +0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.2 +0.3 +0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 -0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.4 +0.5 +0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.3 +0.4 +0.2 +0.1
auxotrophy YNB Glucose -0.1 -0.1 -0.1 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 +0.3 -0.4 +0.1
growth on oleic acid YNB Glucose -0.1 -0.1 +0.4 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 +0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 +0.3 +0.5 +0.1
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