Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12592 and 12593 are separated by 355 nucleotides12593 and 12594 are separated by 319 nucleotides12594 and 12595 are separated by 207 nucleotides12595 and 12596 are separated by 54 nucleotides mRNA_4224: 12592 - Hypothetical Protein, at 1,650,679 to 1,653,904 12592 mRNA_4225: 12593 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 1,654,260 to 1,655,493 12593 mRNA_4226: 12594 - K00700 GBE1, glgB 1,4-alpha-glucan branching enzyme, at 1,655,813 to 1,659,134 12594 mRNA_4227: 12595 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF48452, at 1,659,342 to 1,664,294 12595 mRNA_4228: 12596 - K00995 pgsA, PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 1,664,349 to 1,666,570 12596
Group Condition mRNA_4224 mRNA_4225 mRNA_4226 mRNA_4227 mRNA_4228
12592 12593 12594 12595 12596
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 -3.2 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.1 -3.3 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.2 -1.8 -0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.3 +0.1 -1.5 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.5 -0.1 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.5 +0.1 -0.5 +0.1 N.D.
growth on ypd YPD -0.4 +0.2 -0.5 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.2 -0.6 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.2 -0.5 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 -0.4 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 +0.0 +0.0 N.D.
auxotrophy Dropout Complete -0.3 +0.0 +0.4 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.3 -0.4 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 +0.2 -0.1 N.D.
auxotrophy YNB Glucose -0.1 -0.1 +0.4 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.5 +0.1 +0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.3 +0.4 +0.2 +0.1 N.D.
growth on oleic acid YNB Glucose -0.1 +0.4 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +0.1 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.3 +0.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.3 +0.5 +0.1 N.D.
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