Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12594 and 12595 are separated by 207 nucleotides12595 and 12596 are separated by 54 nucleotides12596 and 12597 are separated by 153 nucleotides12597 and 12598 are separated by 423 nucleotides mRNA_4226: 12594 - K00700 GBE1, glgB 1,4-alpha-glucan branching enzyme, at 1,655,813 to 1,659,134 12594 mRNA_4227: 12595 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF48452, at 1,659,342 to 1,664,294 12595 mRNA_4228: 12596 - K00995 pgsA, PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 1,664,349 to 1,666,570 12596 mRNA_4229: 12597 - K03145 TFIIS transcription elongation factor S-II, at 1,666,724 to 1,668,318 12597 mRNA_4230: 12598 - KOG1659 Class 2 transcription repressor NC2, alpha subunit (DRAP1), at 1,668,742 to 1,669,106 12598
Group Condition mRNA_4226 mRNA_4227 mRNA_4228 mRNA_4229 mRNA_4230
12594 12595 12596 12597 12598
growth on ricinoleic acid YNB Ricinoleic Acid -3.3 +0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -3.2 +0.2 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -1.8 -0.1 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid -1.5 +0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.2 N.D. N.D. N.D.
growth on ypd YPD -0.5 +0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.5 +0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1 N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.2 -0.2 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.0 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.1 N.D. N.D. N.D.
auxotrophy Dropout Complete +0.4 -0.0 N.D. N.D. N.D.
auxotrophy YNB Glucose +0.4 +0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.1 N.D. N.D. N.D.
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