Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12599 and 12600 are separated by 1660 nucleotides12600 and 12601 are separated by 152 nucleotides12601 and 12602 are separated by 177 nucleotides12602 and 12603 are separated by 439 nucleotides mRNA_4231: 12599 - KOG4476 Gluconate transport-inducing protein, at 1,669,682 to 1,672,278 12599 mRNA_4232: 12600 - K14832 MAK21, NOC1, CEBPZ ribosome biogenesis protein MAK21, at 1,673,939 to 1,677,855 12600 mRNA_4233: 12601 - K11096 SNRPD2, SMD2 small nuclear ribonucleoprotein D2, at 1,678,008 to 1,678,995 12601 mRNA_4234: 12602 - SUPERFAMILY--SSF56112, at 1,679,173 to 1,681,802 12602 mRNA_4235: 12603 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1,682,242 to 1,685,142 12603
Group Condition mRNA_4231 mRNA_4232 mRNA_4233 mRNA_4234 mRNA_4235
12599 12600 12601 12602 12603
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. N.D. -0.5 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. N.D. -0.3 -0.2
growth on ricinoleic acid YNB Glucose +0.0 N.D. N.D. -0.4 +0.1
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. -0.4 +0.0
auxotrophy YNB Glucose +0.1 N.D. N.D. -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. N.D. -0.4 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. N.D. -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 N.D. N.D. -0.0 -0.1
auxotrophy Dropout Complete +0.2 N.D. N.D. -0.2 -0.2
growth on oleic acid YNB Glucose +0.0 N.D. N.D. -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. N.D. +0.2 -0.2
growth on ypd YPD +0.0 N.D. N.D. -0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. N.D. -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. N.D. -0.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. N.D. +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. N.D. +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. N.D. +0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 N.D. N.D. +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. N.D. +0.2 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. N.D. +0.0 +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. N.D. +0.3 +0.4
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