Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12603 and 12604 are separated by 220 nucleotides12604 and 12605 are separated by 674 nucleotides12605 and 12606 are separated by 553 nucleotides12606 and 12607 are separated by 346 nucleotides mRNA_4235: 12603 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1,682,242 to 1,685,142 12603 mRNA_4236: 12604 - HMMPfam-pinin/SDK/memA/ protein conserved region-PF04696, at 1,685,363 to 1,686,839 12604 mRNA_4237: 12605 - K15100 SLC25A1, CTP solute carrier family 25 (mitochondrial citrate transporter), member 1, at 1,687,514 to 1,688,995 12605 mRNA_4238: 12606 - KOG1105 Transcription elongation factor TFIIS/Cofactor of enhancer-binding protein Sp1, at 1,689,549 to 1,691,062 12606 mRNA_4239: 12607 - Hypothetical Protein, at 1,691,409 to 1,692,539 12607
Group Condition mRNA_4235 mRNA_4236 mRNA_4237 mRNA_4238 mRNA_4239
12603 12604 12605 12606 12607
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -1.1 -1.3 -0.4 +0.7
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -1.1 -1.0 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -2.0 +0.7 +0.1 +0.3
auxotrophy Dropout Complete -0.2 -0.7 +0.2 -0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.5 -1.1 +0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.3 -0.0 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 -0.2 -0.0 -0.1
growth on oleic acid YNB Glucose +0.1 +0.6 -1.1 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.7 -0.4 +0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 +0.0 +0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.3 +0.3 -0.0 -0.1
growth on ricinoleic acid YNB Glucose +0.1 -0.1 +1.0 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.3 +0.3 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.3 +0.3 +0.1 +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.4 +0.3 +0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.0 +0.7 +0.3 +0.2 -0.1
auxotrophy YNB Glucose -0.1 -0.2 +1.1 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +1.0 +0.5 -0.2 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.6 +2.4 +0.3 +0.2
growth on ypd YPD -0.0 -0.4 +2.2 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.3 +1.4 +0.4 +0.2
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