Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12604 and 12605 are separated by 674 nucleotides12605 and 12606 are separated by 553 nucleotides12606 and 12607 are separated by 346 nucleotides12607 and 12608 are separated by 409 nucleotides mRNA_4236: 12604 - HMMPfam-pinin/SDK/memA/ protein conserved region-PF04696, at 1,685,363 to 1,686,839 12604 mRNA_4237: 12605 - K15100 SLC25A1, CTP solute carrier family 25 (mitochondrial citrate transporter), member 1, at 1,687,514 to 1,688,995 12605 mRNA_4238: 12606 - KOG1105 Transcription elongation factor TFIIS/Cofactor of enhancer-binding protein Sp1, at 1,689,549 to 1,691,062 12606 mRNA_4239: 12607 - Hypothetical Protein, at 1,691,409 to 1,692,539 12607 mRNA_4240: 12608 - KOG1700 Regulatory protein MLP and related LIM proteins, at 1,692,949 to 1,695,625 12608
Group Condition mRNA_4236 mRNA_4237 mRNA_4238 mRNA_4239 mRNA_4240
12604 12605 12606 12607 12608
facs on lipid accumulation Sorted High BODIPY Gate -1.1 -1.0 -0.1 -0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 -1.3 -0.4 +0.7 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.4 +0.3 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.0 +0.7 +0.1 +0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.0 -0.2 -0.1 -0.1
auxotrophy Dropout Complete -0.7 +0.2 -0.1 +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.3 -0.0 -0.1 -0.2
growth on oleic acid YNB Glucose +0.6 -1.1 +0.2 -0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.5 -1.1 +0.0 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 -0.0 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 +0.0 -0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.3 +0.2 -0.1 +0.0
growth on ricinoleic acid YNB Glucose -0.1 +1.0 -0.0 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.3 +0.1 +0.4 +0.1
growth on oleic acid YNB Oleic Acid +0.7 +0.3 +0.2 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.3 +0.1 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 +0.5 -0.2 +0.3 +0.1
auxotrophy YNB Glucose -0.2 +1.1 +0.4 +0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.6 +2.4 +0.3 +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 +1.4 +0.4 +0.2 +0.1
growth on ypd YPD -0.4 +2.2 +0.1 +0.2 +0.4
remove
mRNA_4236
plot
remove
mRNA_4237
plot
remove
mRNA_4238
remove
mRNA_4239
plot
remove
mRNA_4240
plot