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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12611 and 12612 are separated by 114 nucleotides
12612 and 12613 are separated by 95 nucleotides
12613 and 12614 are separated by 105 nucleotides
12614 and 12615 are separated by 147 nucleotides
mRNA_4243: 12611 - HMMPfam-F-box-like-PF12937, at 1,698,723 to 1,700,079
12611
mRNA_4244: 12612 - Hypothetical Protein, at 1,700,194 to 1,701,109
12612
mRNA_4245: 12613 - Hypothetical Protein, at 1,701,205 to 1,702,275
12613
mRNA_4246: 12614 - KOG1172 Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family), at 1,702,381 to 1,705,218
12614
mRNA_4247: 12615 - KOG3188 Uncharacterized conserved protein, at 1,705,366 to 1,706,539
12615
Group
Condition
mRNA
_4243
mRNA
_4244
mRNA
_4245
mRNA
_4246
mRNA
_4247
12611
12612
12613
12614
12615
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.1
+0.2
-0.1
-1.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.2
+0.3
-0.3
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.7
+0.1
-0.1
-1.5
growth on ypd
YPD
-0.1
-0.3
-0.3
-0.1
+0.7
growth on oleic acid
YNB Glucose
-0.1
+0.2
+0.1
-0.0
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.4
+0.4
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
+0.1
-0.0
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.7
-0.3
-0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.5
-0.2
-0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.3
-0.1
+0.1
-0.0
auxotrophy
YNB Glucose
+0.1
+0.7
-0.2
+0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.3
+0.1
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.7
-0.2
-0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.5
+0.7
+0.1
+0.0
-0.5
auxotrophy
Dropout Complete
+0.3
+0.7
-0.3
-0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.5
+0.0
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
-0.1
+0.9
+0.2
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.7
+0.1
+0.1
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.6
+0.0
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
+0.3
+0.3
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
+0.3
+0.1
-0.1
+0.2
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