Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12614 and 12615 are separated by 147 nucleotides12615 and 12616 are separated by 170 nucleotides12616 and 12617 are separated by 617 nucleotides12617 and 12618 are separated by 212 nucleotides mRNA_4246: 12614 - KOG1172 Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family), at 1,702,381 to 1,705,218 12614 mRNA_4247: 12615 - KOG3188 Uncharacterized conserved protein, at 1,705,366 to 1,706,539 12615 mRNA_4248: 12616 - K17764 MMM1 maintenance of mitochondrial morphology protein 1, at 1,706,710 to 1,708,657 12616 mRNA_4249: 12617 - K10436 MAPRE microtubule-associated protein, RP/EB family, at 1,709,275 to 1,710,811 12617 mRNA_4250: 12618 - K08956 AFG3 AFG3 family protein, at 1,711,024 to 1,714,296 12618
Group Condition mRNA_4246 mRNA_4247 mRNA_4248 mRNA_4249 mRNA_4250
12614 12615 12616 12617 12618
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.5 N.D. -0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -1.1 N.D. -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.6 N.D. +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 N.D. -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.5 N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 N.D. +0.0 N.D.
auxotrophy Dropout Complete -0.0 +0.1 N.D. -0.0 N.D.
auxotrophy YNB Glucose +0.0 +0.1 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.2 N.D. +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. -0.0 N.D.
growth on oleic acid YNB Glucose -0.0 -0.3 N.D. +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.2 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 N.D. +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.1 N.D. +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 N.D. +0.3 N.D.
growth on ypd YPD -0.1 +0.7 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.2 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.0 N.D. +0.6 N.D.
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