Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12616 and 12617 are separated by 617 nucleotides
12617 and 12618 are separated by 212 nucleotides
12618 and 12619 are separated by 453 nucleotides
12619 and 12620 are separated by 65 nucleotides
mRNA_4248: 12616 - K17764 MMM1 maintenance of mitochondrial morphology protein 1, at 1,706,710 to 1,708,657
12616
mRNA_4249: 12617 - K10436 MAPRE microtubule-associated protein, RP/EB family, at 1,709,275 to 1,710,811
12617
mRNA_4250: 12618 - K08956 AFG3 AFG3 family protein, at 1,711,024 to 1,714,296
12618
mRNA_4251: 12619 - K07560 dtd, DTD1 D-tyrosyl-tRNA(Tyr) deacylase, at 1,714,750 to 1,715,768
12619
mRNA_4252: 12620 - HMMPfam-Carboxymuconolactone decarboxylase family-PF02627,HMMPfam-Alpha/beta hydrolase family-PF12697,PRINTS-Alpha/beta hydrolase fold signature-PR00111,SUPERFAMILY--SSF53474,SUPERFAMILY--SSF69118, at 1,715,834 to 1,717,453
12620
Group
Condition
mRNA
_4248
mRNA
_4249
mRNA
_4250
mRNA
_4251
mRNA
_4252
12616
12617
12618
12619
12620
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
N.D.
+0.0
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.0
N.D.
+0.0
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.2
N.D.
-0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.4
N.D.
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
N.D.
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.3
N.D.
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.3
N.D.
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.0
N.D.
-0.1
+0.2
growth on oleic acid
YNB Glucose
N.D.
+0.5
N.D.
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
N.D.
-0.0
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
N.D.
+0.1
-0.2
auxotrophy
YNB Glucose
N.D.
-0.0
N.D.
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.0
N.D.
+0.1
+0.1
auxotrophy
Dropout Complete
N.D.
-0.0
N.D.
-0.1
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.3
N.D.
-0.2
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
N.D.
+0.0
+0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
N.D.
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
N.D.
+0.2
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.3
N.D.
+0.3
-0.0
growth on ypd
YPD
N.D.
-0.0
N.D.
+0.6
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.6
N.D.
-0.2
+0.6
remove
mRNA_4248
plot
remove
mRNA_4249
plot
remove
mRNA_4250
remove
mRNA_4251
plot
remove
mRNA_4252
plot