Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12628 and 12629 are separated by 832 nucleotides12629 and 12630 are separated by 165 nucleotides12630 and 12631 are separated by 164 nucleotides12631 and 12632 are separated by 413 nucleotides mRNA_4260: 12628 - K11849 USP25_28, UBP2 ubiquitin carboxyl-terminal hydrolase 25/28, at 1,731,914 to 1,736,985 12628 mRNA_4261: 12629 - HMMPfam-NUDIX domain-PF00293,ProSitePatterns-Nudix box signature.-PS00893,ProSiteProfiles-Nudix hydrolase domain profile.-PS51462,SUPERFAMILY--SSF55811, at 1,737,818 to 1,738,734 12629 mRNA_4262: 12630 - KOG2688 Transcription-associated recombination protein - Thp1p, at 1,738,900 to 1,741,067 12630 mRNA_4263: 12631 - K10416 DYNC1LI, DNCLI dynein light intermediate chain 1, cytosolic, at 1,741,232 to 1,743,677 12631 mRNA_4264: 12632 - Hypothetical Protein, at 1,744,091 to 1,745,665 12632
Group Condition mRNA_4260 mRNA_4261 mRNA_4262 mRNA_4263 mRNA_4264
12628 12629 12630 12631 12632
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -1.2 +0.3 -1.8 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.9 -1.3 +0.7 +0.0
growth on oleic acid YNB Oleic Acid +0.2 -0.2 -0.5 -2.1 +0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.3 -0.8 -0.7 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -1.1 -1.4 +0.3 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.3 -0.3 -1.5 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.9 -0.2 +0.0 -0.2
growth on oleic acid YNB Glucose +0.1 +0.4 +0.1 -1.8 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -1.3 -0.4 +1.0 +0.2
growth on ypd YPD -0.1 -0.1 +0.1 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.4 -0.8 -0.5 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.6 -0.9 -0.4 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 -0.4 +0.8 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.7 +0.1 -0.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.3 +0.2 +0.6 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.2 +0.4 -0.0 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.6 -0.5 +0.4 +0.7
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.4 +0.2 +0.7 +0.7
auxotrophy Dropout Complete +0.3 +0.6 +0.4 +0.5 +0.6
growth on ricinoleic acid YNB Glucose +0.5 +0.7 +0.2 +0.7 +0.7
auxotrophy YNB Glucose +0.3 +0.9 +0.5 +0.7 +0.5
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