Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12629 and 12630 are separated by 165 nucleotides12630 and 12631 are separated by 164 nucleotides12631 and 12632 are separated by 413 nucleotides12632 and 12633 are separated by 526 nucleotides mRNA_4261: 12629 - HMMPfam-NUDIX domain-PF00293,ProSitePatterns-Nudix box signature.-PS00893,ProSiteProfiles-Nudix hydrolase domain profile.-PS51462,SUPERFAMILY--SSF55811, at 1,737,818 to 1,738,734 12629 mRNA_4262: 12630 - KOG2688 Transcription-associated recombination protein - Thp1p, at 1,738,900 to 1,741,067 12630 mRNA_4263: 12631 - K10416 DYNC1LI, DNCLI dynein light intermediate chain 1, cytosolic, at 1,741,232 to 1,743,677 12631 mRNA_4264: 12632 - Hypothetical Protein, at 1,744,091 to 1,745,665 12632 mRNA_4265: 12633 - BLAST lytic polysaccharide monooxygenase [Cenococcum geophi..., at 1,746,192 to 1,748,005 12633
Group Condition mRNA_4261 mRNA_4262 mRNA_4263 mRNA_4264 mRNA_4265
12629 12630 12631 12632 12633
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 +0.3 -1.8 +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -1.3 +0.7 +0.0 -0.7
growth on oleic acid YNB Oleic Acid -0.2 -0.5 -2.1 +0.6 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.3 -1.5 +0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.8 -0.7 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.1 -1.4 +0.3 +0.5 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.9 -0.2 +0.0 -0.2 -0.0
growth on oleic acid YNB Glucose +0.4 +0.1 -1.8 +0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.8 -0.5 +0.4 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.3 -0.4 +1.0 +0.2 +0.0
growth on ypd YPD -0.1 +0.1 -0.4 +0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.9 -0.4 +0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.4 +0.8 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.7 +0.1 -0.6 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.4 -0.0 +0.5 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.2 +0.6 -0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.5 +0.4 +0.7 +0.1
auxotrophy Dropout Complete +0.6 +0.4 +0.5 +0.6 -0.2
growth on ricinoleic acid YNB Glucose +0.7 +0.2 +0.7 +0.7 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.2 +0.7 +0.7 +0.3
auxotrophy YNB Glucose +0.9 +0.5 +0.7 +0.5 -0.2
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