Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12636 and 12637 are separated by 989 nucleotides
12637 and 12638 are separated by 3112 nucleotides
12638 and 12639 are separated by 110 nucleotides
12639 and 12640 are separated by 305 nucleotides
mRNA_4268: 12636 - K02921 RP-L37Ae, RPL37A large subunit ribosomal protein L37Ae, at 1,752,786 to 1,753,388
12636
mRNA_4269: 12637 - K15634 gpmB probable phosphoglycerate mutase, at 1,754,378 to 1,755,256
12637
mRNA_4270: 12638 - Hypothetical Protein, at 1,758,369 to 1,759,007
12638
mRNA_4271: 12639 - K01196 AGL glycogen debranching enzyme, at 1,759,118 to 1,764,832
12639
mRNA_4272: 12640 - K02433 gatA, QRSL1 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 1,765,138 to 1,767,269
12640
Group
Condition
mRNA
_4268
mRNA
_4269
mRNA
_4270
mRNA
_4271
mRNA
_4272
12636
12637
12638
12639
12640
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
-1.2
-2.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.3
-0.7
-0.5
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.8
-0.2
-0.4
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
-0.5
-0.5
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
-0.2
-0.7
+0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.8
+0.3
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
-0.4
-0.3
N.D.
growth on ypd
YPD
N.D.
+0.3
-0.7
-0.0
N.D.
growth on oleic acid
YNB Glucose
N.D.
+0.0
-0.3
-0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
+0.2
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.3
-0.0
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
+0.6
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
+0.1
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.5
+1.0
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
-0.4
+0.7
N.D.
auxotrophy
Dropout Complete
N.D.
+0.5
+0.2
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
+0.5
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.4
+0.5
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
+1.0
+0.2
N.D.
auxotrophy
YNB Glucose
N.D.
+0.7
+0.4
+0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.0
+1.2
+0.2
N.D.
remove
mRNA_4268
plot
remove
mRNA_4269
plot
remove
mRNA_4270
remove
mRNA_4271
plot
remove
mRNA_4272
plot