Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12636 and 12637 are separated by 989 nucleotides12637 and 12638 are separated by 3112 nucleotides12638 and 12639 are separated by 110 nucleotides12639 and 12640 are separated by 305 nucleotides mRNA_4268: 12636 - K02921 RP-L37Ae, RPL37A large subunit ribosomal protein L37Ae, at 1,752,786 to 1,753,388 12636 mRNA_4269: 12637 - K15634 gpmB probable phosphoglycerate mutase, at 1,754,378 to 1,755,256 12637 mRNA_4270: 12638 - Hypothetical Protein, at 1,758,369 to 1,759,007 12638 mRNA_4271: 12639 - K01196 AGL glycogen debranching enzyme, at 1,759,118 to 1,764,832 12639 mRNA_4272: 12640 - K02433 gatA, QRSL1 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 1,765,138 to 1,767,269 12640
Group Condition mRNA_4268 mRNA_4269 mRNA_4270 mRNA_4271 mRNA_4272
12636 12637 12638 12639 12640
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 -1.2 -2.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.7 -0.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.8 -0.2 -0.4 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.2 -0.5 -0.5 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.7 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.8 +0.3 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.4 -0.3 N.D.
growth on ypd YPD N.D. +0.3 -0.7 -0.0 N.D.
growth on oleic acid YNB Glucose N.D. +0.0 -0.3 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 +0.2 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 -0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 +0.6 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 +0.1 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.5 +1.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 -0.4 +0.7 N.D.
auxotrophy Dropout Complete N.D. +0.5 +0.2 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 +0.5 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 +0.5 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +1.0 +0.2 N.D.
auxotrophy YNB Glucose N.D. +0.7 +0.4 +0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.0 +1.2 +0.2 N.D.
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