Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12637 and 12638 are separated by 3112 nucleotides12638 and 12639 are separated by 110 nucleotides12639 and 12640 are separated by 305 nucleotides12640 and 12641 are separated by 386 nucleotides mRNA_4269: 12637 - K15634 gpmB probable phosphoglycerate mutase, at 1,754,378 to 1,755,256 12637 mRNA_4270: 12638 - Hypothetical Protein, at 1,758,369 to 1,759,007 12638 mRNA_4271: 12639 - K01196 AGL glycogen debranching enzyme, at 1,759,118 to 1,764,832 12639 mRNA_4272: 12640 - K02433 gatA, QRSL1 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 1,765,138 to 1,767,269 12640 mRNA_4273: 12641 - BLAST cellular morphogenesis-related protein [Monilioph..., at 1,767,656 to 1,771,232 12641
Group Condition mRNA_4269 mRNA_4270 mRNA_4271 mRNA_4272 mRNA_4273
12637 12638 12639 12640 12641
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -1.2 -2.2 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.2 -0.4 N.D. -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.7 -0.5 N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.2 -0.5 -0.5 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.8 +0.3 -0.2 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.4 -0.3 N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.6 -0.4 N.D. -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 +0.2 N.D. -0.5
growth on ypd YPD +0.3 -0.7 -0.0 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 -0.2 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.7 +0.1 N.D. +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.0 -0.2 N.D. -0.1
growth on oleic acid YNB Glucose +0.0 -0.3 -0.1 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.5 +1.0 -0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.4 +0.7 N.D. +0.1
auxotrophy Dropout Complete +0.5 +0.2 +0.1 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.5 +0.2 N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +1.2 +0.2 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.5 +0.1 N.D. +0.3
auxotrophy YNB Glucose +0.7 +0.4 +0.2 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +1.0 +0.2 N.D. +0.3
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