Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12642 and 12643 are separated by 242 nucleotides12643 and 12644 are separated by 365 nucleotides12644 and 12645 are separated by 1947 nucleotides12645 and 12646 are separated by 729 nucleotides mRNA_4274: 12642 - K01720 prpD 2-methylcitrate dehydratase, at 1,771,477 to 1,773,946 12642 mRNA_4275: 12643 - HMMPfam-RhoGEF domain-PF00621,ProSiteProfiles-Dbl homology (DH) domain profile.-PS50010,SUPERFAMILY--SSF48065, at 1,774,189 to 1,777,372 12643 mRNA_4276: 12644 - Hypothetical Protein, at 1,777,738 to 1,779,130 12644 mRNA_4277: 12645 - K08773 RALBP1 RalA-binding protein 1, at 1,781,078 to 1,785,287 12645 mRNA_4278: 12646 - HMMPfam-Voltage-dependent anion channel-PF03595, at 1,786,017 to 1,788,218 12646
Group Condition mRNA_4274 mRNA_4275 mRNA_4276 mRNA_4277 mRNA_4278
12642 12643 12644 12645 12646
growth on oleic acid YNB Oleic Acid -1.8 +0.3 -0.4 -0.4 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 +0.2 -0.3 -0.6 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.0 -0.1 -0.6 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -1.1 +0.1 +0.2 -0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.6 +0.3 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.2 +0.1 -0.5 -0.1
growth on ricinoleic acid YNB Glucose +0.2 +0.0 -0.2 -0.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.0 +0.1 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.3 -0.5 -0.6 -0.0
growth on oleic acid YNB Glucose +0.2 +0.1 -0.5 -0.4 +0.0
auxotrophy YNB Glucose +0.4 +0.2 -0.3 -0.7 -0.2
growth on ypd YPD +0.0 -0.0 +0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 +0.3 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 +0.3 -0.1 -0.2
auxotrophy Dropout Complete +0.4 +0.4 +0.1 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.3 +0.1 -0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 +0.2 +0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.7 +0.3 +0.1 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.0 +0.4 -0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.3 +0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.4 +0.3 -0.2 +0.1
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