Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12645 and 12646 are separated by 729 nucleotides12646 and 12647 are separated by 190 nucleotides12647 and 12648 are separated by 100 nucleotides12648 and 12649 are separated by 461 nucleotides mRNA_4277: 12645 - K08773 RALBP1 RalA-binding protein 1, at 1,781,078 to 1,785,287 12645 mRNA_4278: 12646 - HMMPfam-Voltage-dependent anion channel-PF03595, at 1,786,017 to 1,788,218 12646 mRNA_4279: 12647 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1,788,409 to 1,790,808 12647 mRNA_4280: 12648 - HMMPfam-Actin interacting protein 3-PF03915,SMART-Actin interacting protein 3-SM00806, at 1,790,909 to 1,794,329 12648 mRNA_4281: 12649 - K11778 DHDDS, RER2, SRT1 ditrans,polycis-polyprenyl diphosphate synthase, at 1,794,791 to 1,795,923 12649
Group Condition mRNA_4277 mRNA_4278 mRNA_4279 mRNA_4280 mRNA_4281
12645 12646 12647 12648 12649
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.1 -0.1 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 -0.3 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1 -0.2 +0.5 N.D.
growth on ypd YPD -0.0 -0.1 -0.1 +0.0 N.D.
auxotrophy YNB Glucose -0.7 -0.2 -0.0 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.1 +0.1 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 +0.2 -0.3 N.D.
auxotrophy Dropout Complete -0.6 -0.1 -0.0 +0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.0 -0.0 +0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 +0.3 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 -0.2 +0.5 N.D.
growth on oleic acid YNB Glucose -0.4 +0.0 -0.1 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.1 +0.4 +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 -0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0 +0.1 +0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 +0.2 +0.7 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 +0.3 +0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.4 +0.4 +1.3 N.D.
growth on ricinoleic acid YNB Glucose -0.4 -0.3 +0.2 +1.1 N.D.
growth on oleic acid YNB Oleic Acid -0.4 +0.1 -0.1 +1.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.1 +0.3 +1.3 N.D.
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