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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12650 and 12651 are separated by 306 nucleotides
12651 and 12652 are separated by 314 nucleotides
12652 and 12653 are separated by 63 nucleotides
12653 and 12654 are separated by 92 nucleotides
mRNA_4282: 12650 - Hypothetical Protein, at 1,796,863 to 1,797,558
12650
mRNA_4283: 12651 - KOG2383 Predicted ATPase, at 1,797,865 to 1,800,888
12651
mRNA_4284: 12652 - KOG2806 Chitinase, at 1,801,203 to 1,803,513
12652
mRNA_4285: 12653 - K18162 NDUFAF5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5, at 1,803,577 to 1,805,345
12653
mRNA_4286: 12654 - K01288 KEX1 carboxypeptidase D, at 1,805,438 to 1,808,326
12654
Group
Condition
mRNA
_4282
mRNA
_4283
mRNA
_4284
mRNA
_4285
mRNA
_4286
12650
12651
12652
12653
12654
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.8
-0.0
+0.1
N.D.
-1.8
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
+0.1
+0.2
N.D.
-1.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.4
-0.2
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.2
+0.0
N.D.
-0.3
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
+0.0
N.D.
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.5
-0.1
-0.4
N.D.
-0.3
auxotrophy
YNB Glucose
-0.1
-0.1
+0.4
N.D.
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
-0.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.1
+0.3
N.D.
-0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
+0.4
N.D.
-0.3
growth on ypd
YPD
-0.0
-0.1
+0.2
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.2
+0.3
N.D.
-0.0
growth on oleic acid
YNB Glucose
-0.1
-0.0
+0.0
N.D.
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.1
-0.3
N.D.
+0.7
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.3
-0.3
N.D.
-0.1
auxotrophy
Dropout Complete
-0.1
-0.2
+0.3
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.0
+0.5
N.D.
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.0
-0.1
N.D.
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.0
+0.6
N.D.
+0.2
growth on oleic acid
YNB Oleic Acid
+0.2
+0.0
+0.3
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.1
+0.1
N.D.
+0.7
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