Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12654 and 12655 are separated by 184 nucleotides12655 and 12656 are separated by 129 nucleotides12656 and 12657 are separated by 343 nucleotides12657 and 12658 are separated by 225 nucleotides mRNA_4286: 12654 - K01288 KEX1 carboxypeptidase D, at 1,805,438 to 1,808,326 12654 mRNA_4287: 12655 - K14559 MPP10 U3 small nucleolar RNA-associated protein MPP10, at 1,808,511 to 1,811,471 12655 mRNA_4288: 12656 - Hypothetical Protein, at 1,811,601 to 1,812,350 12656 mRNA_4289: 12657 - K15445 TRMT10A, TRM10, RG9MTD2 tRNA (guanine9-N1)-methyltransferase, at 1,812,694 to 1,814,089 12657 mRNA_4290: 12658 - Hypothetical Protein, at 1,814,315 to 1,814,636 12658
Group Condition mRNA_4286 mRNA_4287 mRNA_4288 mRNA_4289 mRNA_4290
12654 12655 12656 12657 12658
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. +0.8 +0.0 -2.7
auxotrophy YNB Glucose 75mM Methionine -0.7 N.D. +0.3 -1.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.8 N.D. -0.3 -0.7 +1.7
facs on lipid accumulation Sorted No BODIPY Gate -1.5 N.D. -0.4 -0.5 +1.6
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. +0.2 -0.8 -0.5
auxotrophy YNB Glucose -0.4 N.D. +0.5 -0.6 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. +0.6 -0.8 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.2 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -0.1 -0.4 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. +0.8 +0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. -0.1 -0.4 +0.4
auxotrophy Dropout Complete +0.2 N.D. +0.4 -1.1 +0.7
growth on oleic acid YNB Glucose +0.0 N.D. +0.4 -0.3 +0.5
growth on oleic acid YNB Oleic Acid +0.2 N.D. +0.6 -0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 N.D. +0.1 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. +0.1 +0.3 +1.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 N.D. -0.2 +0.8 +0.1
growth on ricinoleic acid YNB Glucose +0.2 N.D. -0.0 +0.8 +1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. +0.3 +0.1 +2.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. +0.6 +0.2 +1.6
growth on ypd YPD -0.1 N.D. +0.2 +0.1 +2.7
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