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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12656 and 12657 are separated by 343 nucleotides
12657 and 12658 are separated by 225 nucleotides
12658 and 12659 are separated by 734 nucleotides
12659 and 12660 are separated by 995 nucleotides
mRNA_4288: 12656 - Hypothetical Protein, at 1,811,601 to 1,812,350
12656
mRNA_4289: 12657 - K15445 TRMT10A, TRM10, RG9MTD2 tRNA (guanine9-N1)-methyltransferase, at 1,812,694 to 1,814,089
12657
mRNA_4290: 12658 - Hypothetical Protein, at 1,814,315 to 1,814,636
12658
mRNA_4291: 12659 - Hypothetical Protein, at 1,815,371 to 1,816,823
12659
mRNA_4292: 12660 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1,817,819 to 1,819,208
12660
Group
Condition
mRNA
_4288
mRNA
_4289
mRNA
_4290
mRNA
_4291
mRNA
_4292
12656
12657
12658
12659
12660
ypd buoyancy
40 hrs No Buoyancy Separation
+0.8
+0.0
-2.7
+0.7
-2.0
auxotrophy
YNB Glucose
+0.5
-0.6
-0.2
-0.4
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-1.2
+0.2
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.8
-0.5
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.6
-0.8
+0.2
-0.3
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.7
+1.7
+0.1
-1.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.4
+0.4
+0.2
-0.5
auxotrophy
Dropout Complete
+0.4
-1.1
+0.7
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.4
+0.3
-0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.8
+0.1
-0.5
-0.2
+0.0
growth on oleic acid
YNB Glucose
+0.4
-0.3
+0.5
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.4
+0.1
+0.1
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.5
+1.6
+0.6
-0.8
growth on oleic acid
YNB Oleic Acid
+0.6
-0.1
+0.3
-0.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.2
+0.2
-0.1
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.8
+0.1
-0.4
+1.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.3
+1.2
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
+0.2
+1.6
-0.7
-0.3
growth on ricinoleic acid
YNB Glucose
-0.0
+0.8
+1.0
-0.3
+0.5
growth on ypd
YPD
+0.2
+0.1
+2.7
-0.4
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.1
+2.1
-0.1
+0.3
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