Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12658 and 12659 are separated by 734 nucleotides12659 and 12660 are separated by 995 nucleotides12660 and 12661 are separated by 1217 nucleotides12661 and 12662 are separated by 218 nucleotides mRNA_4290: 12658 - Hypothetical Protein, at 1,814,315 to 1,814,636 12658 mRNA_4291: 12659 - Hypothetical Protein, at 1,815,371 to 1,816,823 12659 mRNA_4292: 12660 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1,817,819 to 1,819,208 12660 mRNA_4293: 12661 - KOG1375 Beta tubulin, at 1,820,426 to 1,822,919 12661 mRNA_4294: 12662 - K08851 TP53RK, PRPK, BUD32 TP53 regulating kinase and related kinases, at 1,823,138 to 1,824,204 12662
Group Condition mRNA_4290 mRNA_4291 mRNA_4292 mRNA_4293 mRNA_4294
12658 12659 12660 12661 12662
ypd buoyancy 40 hrs No Buoyancy Separation -2.7 +0.7 -2.0 N.D. N.D.
auxotrophy YNB Glucose -0.2 -0.4 -0.3 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.2 +0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.3 -0.6 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.0 +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.1 -0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.2 -0.5 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.3 -0.0 -0.0 N.D. N.D.
growth on oleic acid YNB Glucose +0.5 -0.1 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.2 +0.2 N.D. N.D.
auxotrophy Dropout Complete +0.7 -0.3 +0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +1.7 +0.1 -1.4 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.6 -0.7 -0.3 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.1 +0.7 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.4 +1.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.2 -0.2 +0.0 N.D. N.D.
growth on ricinoleic acid YNB Glucose +1.0 -0.3 +0.5 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +1.6 +0.6 -0.8 N.D. N.D.
growth on ypd YPD +2.7 -0.4 -0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +2.1 -0.1 +0.3 N.D. N.D.
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