Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12665 and 12666 are separated by 137 nucleotides12666 and 12667 are separated by 228 nucleotides12667 and 12668 are separated by 268 nucleotides12668 and 12669 are separated by 2146 nucleotides mRNA_4297: 12665 - K01166 E3.1.27.1 ribonuclease T2, at 1,829,506 to 1,831,349 12665 mRNA_4298: 12666 - Hypothetical Protein, at 1,831,487 to 1,832,179 12666 mRNA_4299: 12667 - K12617 PATL1, PAT1 DNA topoisomerase 2-associated protein PAT1, at 1,832,408 to 1,835,999 12667 mRNA_4300: 12668 - K08257 E3.2.1.101 mannan endo-1,6-alpha-mannosidase, at 1,836,268 to 1,838,617 12668 mRNA_4301: 12669 - Hypothetical Protein, at 1,840,764 to 1,841,675 12669
Group Condition mRNA_4297 mRNA_4298 mRNA_4299 mRNA_4300 mRNA_4301
12665 12666 12667 12668 12669
growth on ypd YPD -0.1 N.D. -1.5 -1.0 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. -1.2 -0.9 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. -1.7 +0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -0.0 -1.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. -0.7 -0.6 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. +0.5 -2.0 -0.2
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.2 -1.5 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.1 -0.3 -0.7
growth on ricinoleic acid YNB Glucose +0.3 N.D. -0.0 -0.8 -0.4
growth on oleic acid YNB Glucose -0.0 N.D. -0.3 -0.7 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.5 -1.7 +0.5
auxotrophy Dropout Complete +0.3 N.D. +0.4 -1.4 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.1 -0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.1 -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. -0.3 +0.7 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. +0.5 -1.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 N.D. +0.9 -0.8 -0.4
auxotrophy YNB Glucose +0.3 N.D. +1.6 -1.4 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. +0.9 -0.5 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 N.D. +0.6 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. +1.2 -0.1 -0.3
remove
mRNA_4297
plot
remove
mRNA_4298
plot
remove
mRNA_4299
remove
mRNA_4300
plot
remove
mRNA_4301
plot