Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12668 and 12669 are separated by 2146 nucleotides12669 and 12670 are separated by 193 nucleotides12670 and 12671 are separated by 1170 nucleotides12671 and 12672 are separated by 788 nucleotides mRNA_4300: 12668 - K08257 E3.2.1.101 mannan endo-1,6-alpha-mannosidase, at 1,836,268 to 1,838,617 12668 mRNA_4301: 12669 - Hypothetical Protein, at 1,840,764 to 1,841,675 12669 mRNA_4302: 12670 - K07819 B3GALT1 beta-1,3-galactosyltransferase 1, at 1,841,869 to 1,845,358 12670 mRNA_4303: 12671 - K14005 SEC31 protein transport protein SEC31, at 1,846,529 to 1,852,379 12671 mRNA_4304: 12672 - Hypothetical Protein, at 1,853,168 to 1,855,421 12672
Group Condition mRNA_4300 mRNA_4301 mRNA_4302 mRNA_4303 mRNA_4304
12668 12669 12670 12671 12672
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 -0.4 -1.1 N.D. -0.2
growth on ypd YPD -1.0 -0.6 -0.1 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.6 -0.3 -0.2 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -2.0 -0.2 +1.0 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.7 +0.3 N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine -1.7 +0.5 +0.3 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy -0.9 -0.1 -0.0 N.D. +0.2
auxotrophy YNB Glucose -1.4 +0.2 +0.3 N.D. -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.7 -0.1 -1.3 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine -1.1 +0.3 +0.2 N.D. +0.0
growth on ricinoleic acid YNB Glucose -0.8 -0.4 +0.6 N.D. +0.0
auxotrophy Dropout Complete -1.4 +0.3 +0.3 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.1 +0.0 N.D. +0.0
growth on oleic acid YNB Oleic Acid -1.5 +0.3 +0.8 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 +0.0 N.D. -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 -0.1 N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -1.5 -0.1 +1.3 N.D. +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.1 -0.2 N.D. +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.0 +0.7 N.D. -0.2
growth on oleic acid YNB Glucose -0.7 +0.3 +0.8 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.2 +1.8 N.D. +0.0
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