Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12670 and 12671 are separated by 1170 nucleotides
12671 and 12672 are separated by 788 nucleotides
12672 and 12673 are separated by 1495 nucleotides
12673 and 12674 are separated by 316 nucleotides
mRNA_4302: 12670 - K07819 B3GALT1 beta-1,3-galactosyltransferase 1, at 1,841,869 to 1,845,358
12670
mRNA_4303: 12671 - K14005 SEC31 protein transport protein SEC31, at 1,846,529 to 1,852,379
12671
mRNA_4304: 12672 - Hypothetical Protein, at 1,853,168 to 1,855,421
12672
mRNA_4305: 12673 - SUPERFAMILY--SSF69989, at 1,856,917 to 1,859,154
12673
mRNA_4306: 12674 - Hypothetical Protein, at 1,859,471 to 1,861,932
12674
Group
Condition
mRNA
_4302
mRNA
_4303
mRNA
_4304
mRNA
_4305
mRNA
_4306
12670
12671
12672
12673
12674
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.1
N.D.
-0.2
-0.1
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-1.3
N.D.
+0.1
+0.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
N.D.
+0.6
-1.4
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
N.D.
+0.0
-0.5
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.3
N.D.
-0.0
-0.9
+0.2
auxotrophy
Dropout Complete
+0.3
N.D.
+0.3
-0.8
-0.0
growth on oleic acid
YNB Oleic Acid
+0.8
N.D.
+0.0
-0.9
-0.2
auxotrophy
YNB Glucose
+0.3
N.D.
-0.0
-0.6
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
+0.0
-0.4
+0.1
growth on ypd
YPD
-0.1
N.D.
-0.3
+0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
+0.2
-0.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.3
N.D.
-0.3
+0.4
-0.2
growth on ricinoleic acid
YNB Glucose
+0.6
N.D.
+0.0
+0.1
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
N.D.
-0.4
+0.7
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
N.D.
-0.1
+0.6
+0.2
growth on oleic acid
YNB Glucose
+0.8
N.D.
+0.1
-0.6
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
N.D.
-0.2
-0.2
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.3
N.D.
+0.3
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
+0.3
+0.1
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.0
N.D.
+0.2
+0.4
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+1.8
N.D.
+0.0
-0.4
+0.5
remove
mRNA_4302
plot
remove
mRNA_4303
plot
remove
mRNA_4304
remove
mRNA_4305
plot
remove
mRNA_4306
plot