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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12672 and 12673 are separated by 1495 nucleotides
12673 and 12674 are separated by 316 nucleotides
12674 and 12675 are separated by 43 nucleotides
12675 and 12676 are separated by 467 nucleotides
mRNA_4304: 12672 - Hypothetical Protein, at 1,853,168 to 1,855,421
12672
mRNA_4305: 12673 - SUPERFAMILY--SSF69989, at 1,856,917 to 1,859,154
12673
mRNA_4306: 12674 - Hypothetical Protein, at 1,859,471 to 1,861,932
12674
mRNA_4307: 12675 - Hypothetical Protein, at 1,861,976 to 1,862,718
12675
mRNA_4308: 12676 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407, at 1,863,186 to 1,865,063
12676
Group
Condition
mRNA
_4304
mRNA
_4305
mRNA
_4306
mRNA
_4307
mRNA
_4308
12672
12673
12674
12675
12676
growth on oleic acid
YNB Oleic Acid
+0.0
-0.9
-0.2
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.5
-0.0
+0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.9
+0.2
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.4
-0.4
+0.0
-0.0
growth on ricinoleic acid
YNB Glucose
+0.0
+0.1
-0.5
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.2
+0.2
-0.0
-0.3
auxotrophy
YNB Glucose
-0.0
-0.6
+0.1
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.4
+0.1
-0.1
+0.1
growth on oleic acid
YNB Glucose
+0.1
-0.6
+0.1
-0.1
+0.1
auxotrophy
Dropout Complete
+0.3
-0.8
-0.0
-0.0
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.4
+0.5
+0.3
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.4
-0.2
-0.0
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.3
+0.2
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
+0.4
+0.1
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.7
-0.1
+0.2
-0.2
growth on ypd
YPD
-0.3
+0.2
+0.2
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.1
+0.6
+0.1
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
-1.4
+0.2
+0.2
+0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.4
-0.4
+0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.6
+0.2
+0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.3
-0.1
+0.2
+0.3
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