Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12678 and 12679 are separated by 544 nucleotides12679 and 12680 are separated by 390 nucleotides12680 and 12681 are separated by 1648 nucleotides12681 and 12682 are separated by 382 nucleotides mRNA_4310: 12678 - Hypothetical Protein, at 1,869,804 to 1,870,732 12678 mRNA_4311: 12679 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1,871,277 to 1,872,200 12679 mRNA_4312: 12680 - K14802 DRS2, ATP8A phospholipid-transporting ATPase, at 1,872,591 to 1,877,235 12680 mRNA_4313: 12681 - Hypothetical Protein, at 1,878,884 to 1,880,623 12681 mRNA_4314: 12682 - Hypothetical Protein, at 1,881,006 to 1,883,368 12682
Group Condition mRNA_4310 mRNA_4311 mRNA_4312 mRNA_4313 mRNA_4314
12678 12679 12680 12681 12682
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.0 -1.0 -0.2 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 -0.2 +0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.4 -0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0 +0.1 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.4 -0.0 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 +0.1 +0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 -0.0 +0.1 -0.1
growth on oleic acid YNB Glucose -0.4 -0.1 +0.7 +0.3 -0.2
auxotrophy Dropout Complete -0.1 -0.2 +0.4 +0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.0 +1.1 +0.3 -0.5
growth on oleic acid YNB Oleic Acid -0.1 +0.1 +0.1 +0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 +0.4 +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.1 -0.0 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.3 -0.3 +0.0 +0.3
growth on ricinoleic acid YNB Glucose -0.4 +0.1 +0.8 +0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 +0.2 +0.1 +0.5
auxotrophy YNB Glucose +0.3 -0.3 +0.6 +0.4 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.0 +0.6 +0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 +0.8 +0.3 +0.1
growth on ypd YPD -0.1 +1.1 -0.1 +0.0 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.0 +0.5 +0.6 -0.1
remove
mRNA_4310
plot
remove
mRNA_4311
plot
remove
mRNA_4312
remove
mRNA_4313
plot
remove
mRNA_4314
plot