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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12679 and 12680 are separated by 390 nucleotides
12680 and 12681 are separated by 1648 nucleotides
12681 and 12682 are separated by 382 nucleotides
12682 and 12683 are separated by 165 nucleotides
mRNA_4311: 12679 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1,871,277 to 1,872,200
12679
mRNA_4312: 12680 - K14802 DRS2, ATP8A phospholipid-transporting ATPase, at 1,872,591 to 1,877,235
12680
mRNA_4313: 12681 - Hypothetical Protein, at 1,878,884 to 1,880,623
12681
mRNA_4314: 12682 - Hypothetical Protein, at 1,881,006 to 1,883,368
12682
mRNA_4315: 12683 - Hypothetical Protein, at 1,883,534 to 1,885,607
12683
Group
Condition
mRNA
_4311
mRNA
_4312
mRNA
_4313
mRNA
_4314
mRNA
_4315
12679
12680
12681
12682
12683
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
-1.0
-0.2
-0.7
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.0
+0.0
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.2
+0.1
-0.5
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.0
+0.1
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-0.2
-0.2
-0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.0
+0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.1
+0.3
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.1
+0.0
-0.3
+0.4
growth on oleic acid
YNB Glucose
-0.1
+0.7
+0.3
-0.2
-0.4
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
+0.4
-0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.3
+0.0
+0.3
+0.1
auxotrophy
Dropout Complete
-0.2
+0.4
+0.4
-0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.6
+0.2
+0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
+0.2
+0.1
+0.5
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+1.1
+0.3
-0.5
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.4
+0.2
-0.1
+0.5
auxotrophy
YNB Glucose
-0.3
+0.6
+0.4
-0.1
+0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.5
+0.6
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.8
+0.3
+0.1
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.8
+0.3
-0.1
+0.2
growth on ypd
YPD
+1.1
-0.1
+0.0
+0.4
+0.1
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