Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12682 and 12683 are separated by 165 nucleotides
12683 and 12684 are separated by 871 nucleotides
12684 and 12685 are separated by 906 nucleotides
12685 and 12686 are separated by 109 nucleotides
mRNA_4314: 12682 - Hypothetical Protein, at 1,881,006 to 1,883,368
12682
mRNA_4315: 12683 - Hypothetical Protein, at 1,883,534 to 1,885,607
12683
mRNA_4316: 12684 - K03178 UBE1, UBA1 ubiquitin-activating enzyme E1, at 1,886,479 to 1,890,750
12684
mRNA_4317: 12685 - K07025 K07025 putative hydrolase of the HAD superfamily, at 1,891,657 to 1,892,743
12685
mRNA_4318: 12686 - HMMPfam-SnoaL-like domain-PF13577,SUPERFAMILY--SSF54427, at 1,892,853 to 1,893,990
12686
Group
Condition
mRNA
_4314
mRNA
_4315
mRNA
_4316
mRNA
_4317
mRNA
_4318
12682
12683
12684
12685
12686
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.0
N.D.
-0.7
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.4
N.D.
+0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.1
N.D.
-0.7
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
+0.4
N.D.
-0.9
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
N.D.
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
N.D.
-0.4
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
-0.3
N.D.
-0.6
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
N.D.
-0.3
-0.3
growth on oleic acid
YNB Glucose
-0.2
-0.4
N.D.
+0.3
-0.2
growth on oleic acid
YNB Oleic Acid
-0.0
-0.2
N.D.
+0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.1
N.D.
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.1
N.D.
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.1
N.D.
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.0
N.D.
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.0
N.D.
+0.2
+0.2
auxotrophy
Dropout Complete
-0.2
+0.1
N.D.
+0.4
+0.1
auxotrophy
YNB Glucose
-0.1
+0.4
N.D.
+0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.1
N.D.
+0.3
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.4
N.D.
+0.5
+0.2
growth on ypd
YPD
+0.4
+0.1
N.D.
+0.2
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.5
N.D.
+1.1
+0.3
remove
mRNA_4314
plot
remove
mRNA_4315
plot
remove
mRNA_4316
remove
mRNA_4317
plot
remove
mRNA_4318
plot