Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12688 and 12689 are separated by 291 nucleotides12689 and 12690 are separated by 2208 nucleotides12690 and 12691 are separated by 372 nucleotides12691 and 12692 are separated by 281 nucleotides mRNA_4320: 12688 - K03255 TIF31, CLU1 protein TIF31, at 1,895,347 to 1,900,311 12688 mRNA_4321: 12689 - K14960 CXXC1, SPP1, CPS40 COMPASS component SPP1, at 1,900,603 to 1,903,265 12689 mRNA_4322: 12690 - KOG0254 Predicted transporter (major facilitator superfamily), at 1,905,474 to 1,907,958 12690 mRNA_4323: 12691 - KOG1198 Zinc-binding oxidoreductase, at 1,908,331 to 1,909,628 12691 mRNA_4324: 12692 - K18754 LIN28 protein lin-28, at 1,909,910 to 1,911,534 12692
Group Condition mRNA_4320 mRNA_4321 mRNA_4322 mRNA_4323 mRNA_4324
12688 12689 12690 12691 12692
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -1.1 -0.1 -0.6 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.4 -0.3 -1.4 -0.1
growth on ypd YPD +0.2 -0.2 -0.1 -0.7 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.9 +0.0 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.1 +0.0 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.5 -0.1 -0.5 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.4 -0.6 +0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 +1.1 +0.3 +0.0 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.5 +0.1 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 -0.1 +0.1 +0.0
growth on ricinoleic acid YNB Glucose -0.4 +0.6 +0.0 -0.0 -0.2
auxotrophy YNB Glucose -0.4 +0.6 +0.0 -0.4 +0.1
auxotrophy Dropout Complete -0.1 +0.8 +0.1 -0.6 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.6 -0.1 -0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 +0.0 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.9 -0.1 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.7 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.3 +0.0 +0.3 +0.1
growth on oleic acid YNB Glucose -0.0 +0.8 +0.0 +0.3 -0.5
growth on oleic acid YNB Oleic Acid -0.2 +0.9 +0.2 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 +1.6 +0.9 -0.1 +0.1
remove
mRNA_4320
plot
remove
mRNA_4321
plot
remove
mRNA_4322
remove
mRNA_4323
plot
remove
mRNA_4324
plot