Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12689 and 12690 are separated by 2208 nucleotides12690 and 12691 are separated by 372 nucleotides12691 and 12692 are separated by 281 nucleotides12692 and 12693 are separated by 764 nucleotides mRNA_4321: 12689 - K14960 CXXC1, SPP1, CPS40 COMPASS component SPP1, at 1,900,603 to 1,903,265 12689 mRNA_4322: 12690 - KOG0254 Predicted transporter (major facilitator superfamily), at 1,905,474 to 1,907,958 12690 mRNA_4323: 12691 - KOG1198 Zinc-binding oxidoreductase, at 1,908,331 to 1,909,628 12691 mRNA_4324: 12692 - K18754 LIN28 protein lin-28, at 1,909,910 to 1,911,534 12692 mRNA_4325: 12693 - K03231 EEF1A elongation factor 1-alpha, at 1,912,299 to 1,914,440 12693
Group Condition mRNA_4321 mRNA_4322 mRNA_4323 mRNA_4324 mRNA_4325
12689 12690 12691 12692 12693
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 -1.4 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.1 -0.1 -0.6 -0.3 N.D.
growth on ypd YPD -0.2 -0.1 -0.7 -0.8 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 +0.0 +0.2 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.1 -0.5 -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.0 -0.4 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 +0.0 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.6 +0.1 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 +0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 -0.1 -0.5 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.0 +0.3 +0.1 N.D.
auxotrophy Dropout Complete +0.8 +0.1 -0.6 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.1 -0.1 -0.2 N.D.
auxotrophy YNB Glucose +0.6 +0.0 -0.4 +0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.6 +0.0 -0.0 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.6 -0.1 -0.2 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 -0.1 -0.1 -0.1 N.D.
growth on oleic acid YNB Glucose +0.8 +0.0 +0.3 -0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +1.1 +0.3 +0.0 -0.6 N.D.
growth on oleic acid YNB Oleic Acid +0.9 +0.2 -0.2 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.6 +0.9 -0.1 +0.1 N.D.
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